Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0612 ATGTCTGTGGTTCTTTGTTGCAACGAGGTAAACCAGAAGGCAGAAGCAAAGTTGAGGGCACAAGGGTACCTAAGGTTTGGACAAGATGGAGGCGAGAGAAGCAATCCTACTCGACGTCATTCTTTGCCATCTTCAACTAACAGCAAAATTAGTTCGCATTCACCAAGGAACCATGGAAAAAGAGACCAGTTCAACCTTGTTAGAGTGACTGTTAAGTCACCTTTTGCAGACACCGCTAGTGCTCCCTCCACTTCTGTCTCCCCTGGAACTCTCTGCAACTCCACCCCAGACCCTTCATATTGCAAGTTTCTTCCCAGTTGGCAAGCTGACAAAATCCAAACGCTTCTCAGTGCCATCTTAACTAACCAACAGACCTGCTTGGATGGCCTTCAAGAAACTGCTTCAGGTTGGAGCGTCAAAAATGGCCTCTCCGTCCCACTTTCTAACGACATCAAGCAATACAGTATGTCTCTGGCTCTATTCACAAAGGGATTCCAAAATGGGCGTCTGCCACCTAATATGTCAAGCAGAACACAGGCCATCTGCGAGTCTGTGAGTTGGAGGAACCTGCTTCAGACAACCACTGTGGGCAATGTAGTTAACGTGAGGGACATCGTAACGGTGAGTCAAGACGGAACTGGAAACTTCACCACCATCAATGACGCCATTGCTGCTGCTCCAAACAAGTCTTCCTCTGCAGATGGCTACTTGCTCATCTACGTCATCGCAGGTGTTTACGAAGAATATGTCACCATCGATAAGAAAAAGAAATACTTGATGATGGTCGGAGACGGTATCAACAAGACAATCATTACAGGCAACCGAAATGTCGTTGATGGGTGGACAACCTTCAACTCCGCAACTTTTGGTAATTAA 876 0.4669 MSVVLCCNEVNQKAEAKLRAQGYLRFGQDGGERSNPTRRHSLPSSTNSKISSHSPRNHGKRDQFNLVRVTVKSPFADTASAPSTSVSPGTLCNSTPDPSYCKFLPSWQADKIQTLLSAILTNQQTCLDGLQETASGWSVKNGLSVPLSNDIKQYSMSLALFTKGFQNGRLPPNMSSRTQAICESVSWRNLLQTTTVGNVVNVRDIVTVSQDGTGNFTTINDAIAAAPNKSSSADGYLLIYVIAGVYEEYVTIDKKKKYLMMVGDGINKTIITGNRNVVDGWTTFNSATFGN 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0612 291 SUPERFAMILY Pectin lyase-like 204 289 IPR011050 -
Dere08g0612 291 MobiDBLite consensus disorder prediction 37 53 - -
Dere08g0612 291 PANTHER PECTINESTERASE 108 289 - -
Dere08g0612 291 Pfam Plant invertase/pectin methylesterase inhibitor 106 159 IPR006501 GO:0004857
Dere08g0612 291 Gene3D - 199 291 IPR012334 -
Dere08g0612 291 MobiDBLite consensus disorder prediction 26 63 - -
Dere08g0612 291 Gene3D Invertase/pectin methylesterase inhibitor family protein 102 163 IPR035513 -
Dere08g0612 291 Pfam Pectinesterase 206 290 IPR000070 GO:0030599|GO:0042545
Dere08g0612 291 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 92 163 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0612 Dere-ChrDere08 9227970 9230436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0612 108 290 Carbohydrate Esterase AT4G02330 53.521 5.67e-68 219