Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0611 ATGGCTGAGAGCATATACATATCTGACGAAGACAAGAGTGATACAGATTTGGATGCCAAACCAGCGTCTCTAAGTCCTAAAAAACGTTCATTCTTGGACTTGAACGAAGAAGCTGTGGGTGACGATGACGGTGAGACCAGTATTACTGATAGATCGTCTCCAGAAGGGAATTTGAGCAGCAACAACTTAAGCACAGATCAAGGGAAAGAACGAACAACTAGCGTTAGGCAATACGTGAGGTCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTAGCTTTTGTGCTTGCTGTAGAGAGGCTTGGTGGACAAGAAAGAGCAACTCCCAAGTTGGTTCTTCAGCTGATGAATGTGAGGGGACTTAGCATTGCACATGTAAAAAGTCATTTGCAGATGTATCGAAGTAAAAAACTTGACGAGTCTGGCCAAGTTTTATCTCAAAATAGGGGAATGCAAGGAAGAGATCACATCGTGGAGATGTACGAAAGATATAGTAAAGCCCAAGGACACTTTGGGATAGATCACAGAAACTATCTACCATCATCTGTTCTAATGAAACAGCCGTGTGACTTCAAAGCTCAAGGCTCTTCAAGGTTTCAGCCGTGTGGGATAGGGAATAGCCACTTGACGGGACCAAGTTCAGAGTGGAGCAATAACAGGATGGGAAGCTCGCACTTATTTGATCCAAGGGCTGGAACAAAAAGAAGTGACCCTCTTAGGTGTAGTGAATTTCTTGAAGATAAGAAATGGCCTCCTCGTGAAATGGTTGGAGTTGGATCACAAGGCAGTGATAGAAGCATTTCTTGGGATGACAGGTATAATATTGTAGAACCTAATTCTCTATGGAGAACCAAAGCTAGCTCTATTCATCATGATGATCAATACCAACGTAGTTCCTGTGCTCCAATCTTCTCATCAAGCAACATGCAATTTGATGCCAAGGTTCATGATCTAAAAGATGGAATGCTCCGATTTATAAATGAGGATGCGTTGTGGCGACCAGGTGAGATCAAAGCCCAGTCCGGGAGGTTTGAGGAGAAGGGATCACCAACAAGTTTCTTAGAGTTAAGTTTAAGCCATGATTTTGGAAAGGTTAAAGAGATGAACTCAGGTACACAAAGTGAGCAAGAAGTTGATACGATGCTTTCTCTTTCTTTGTTCCCTTCATCAAAGCAAAATTTCTTACTTTCTCTTCTTTCTGTAAGCTTCAGTTTCTTATCATGCAAGGAGTCAAGCTGGGAAGTTCAGAGAGAAGTTAATTTGTCTGCTGATTACTCGCATGATCTTGACCTAGTGACCTAG 1308 0.4258 MAESIYISDEDKSDTDLDAKPASLSPKKRSFLDLNEEAVGDDDGETSITDRSSPEGNLSSNNLSTDQGKERTTSVRQYVRSKMPRLRWTPDLHLAFVLAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRGMQGRDHIVEMYERYSKAQGHFGIDHRNYLPSSVLMKQPCDFKAQGSSRFQPCGIGNSHLTGPSSEWSNNRMGSSHLFDPRAGTKRSDPLRCSEFLEDKKWPPREMVGVGSQGSDRSISWDDRYNIVEPNSLWRTKASSIHHDDQYQRSSCAPIFSSSNMQFDAKVHDLKDGMLRFINEDALWRPGEIKAQSGRFEEKGSPTSFLELSLSHDFGKVKEMNSGTQSEQEVDTMLSLSLFPSSKQNFLLSLLSVSFSFLSCKESSWEVQREVNLSADYSHDLDLVT 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0611 435 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 67 170 IPR046955 GO:0003700
Dere08g0611 435 NCBIfam myb-like DNA-binding domain, SHAQKYF class 84 139 IPR006447 GO:0003677
Dere08g0611 435 Gene3D - 83 140 - -
Dere08g0611 435 FunFam Myb family transcription factor 82 140 - -
Dere08g0611 435 SUPERFAMILY Homeodomain-like 82 138 IPR009057 -
Dere08g0611 435 MobiDBLite consensus disorder prediction 50 76 - -
Dere08g0611 435 MobiDBLite consensus disorder prediction 1 23 - -
Dere08g0611 435 MobiDBLite consensus disorder prediction 1 76 - -
Dere08g0611 435 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 140 IPR017930 -
Dere08g0611 435 Pfam Myb-like DNA-binding domain 86 136 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0611 Dere-ChrDere08 9217745 9222843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0611 72 145 G2-like Transcription Factor Family AT2G42660 77.027 3.72e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere08g0611 Myb_DNA-binding 3e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0611 08 9217745 9222843 Dere08g0611 08 9217745 9222843 ECH