Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0607 ATGGAGACAGATGATGGGTATAGAAGGAAGGCGCAGATTGCACTAATCACCATAACAGTGCTTACTTCTCTAGCTGTGTTCTCCTTGCTAGTTGCCTTTAGTTACTATTGCTACATCCGGAGCAAGGTTTCCAAGCGCCACAAGAACCAAAAAGATGCTGGCCATAACGAGAAAAGTGACTTCACAAATCTGCAAGTTGTAGCGGATAATGGACTTCAGGTGTACACTTTCAAGCAGTTGCGTTCTGCAACTGGTGGCTTTAGCAAGTCAGATGTAATTGGCCATGGTGGATTTGGACTTGTCTATCGTGGGGTGCTCAATGATGGCAGGAAAGTTGCAGTTAAATTCATGGATGACGCAGGAAAGCATGGAGAAGATGAATTTAAAACAGAGGTGGAGTTGCTAAGTCGGTTGCACTCGCCATATTTGCTGACATTGCTTGGATACTGCTCTGATAATAATCATAAATTGCTGGTGTATGAGTTCATGGCAAATGGTGGTCTGCAGGAGCATCTTTATCCTGTCAGCAATTCTAACGTTACACCCATGAAATTGGATTGGGAGACAAGGTTAAGAATAGCCTTTGAAGCTGCTAAGGGTTTGGAATATCTTCATGAACATGTCAGTCCCCCAGTTATTCACAGAGATTTCAAGACCAGTAACATCCTCCTAGACAAACAATTTCATGCAAAAGTCTCTGACTTCGGATTAGCCAAGCTTGGATCTGATAAAGCTGGTGGACATGTTTCTACTCGAGTTTTGGGCACACATGGATATGTTGCCCCTGAATATGCACTAACCGGGCATTTAACACCCAAATCAGATGTATACAGTTACGGCGTTGTACTTTTGGAGCTGTTAACTGGCCGAGTGCCAGTTGATATGGAGAGACCTCCAGGAGAAGGCGTTCTTGTTTCTTGGGCTTTGCCCATTTTGACTGACAGGGAAAAAATTGCAAAGATTATGGATCCTACGTTGGAAGGTCAGTGCCCAATGAAAGAGGTTATCCAGGTAGCAGCCATTGCTGCAATGTGTGTGCAACCAGAGGCAGATTATAGGCCTCTCATGGCAGACGTTGTGCAGTCATTGGTTCCACTGGTGAGGACCCACAGGATTCTTTGTCGTTTTGGATTGTATCTTCTGGAGAAGATTTTCATCATATCCATGACTCGGTATTCTAATCTTCAGTTTCTAGCTCGTAGAGGATCCCGTGCACGACAAACAGCACCGATCATCATCTTCTCGCAACTGGCCCCAACACTCTTCTCTCGAGACGCAAAGGAGAGAGAAAATAGACTCAGGAAGAGAGAGGAACAAAGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGGGAGTGTGTGTGTGTTTGTGTGACTCTCACATGGCCTCCATGCCCTTGGGGCCGCACCACCATCAACCACCGCAAGCAACAGCTCCACAACCACCACCACCACAGGCACAAGGTGGGAATGACCCACTGAAGCTGGCTGCTCGCCGTGGCTCCGATATGGAGACCGATAAGGAAATGTCAGCTACCGTCATTGAGGGGAATGATGCAGTCACTGGCCACATAATATCCACCACAATTGGAGGCAAAAATGGGGAACCTAAACAGACCATCAGTTACATGGCAGAGCGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGACAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGGTACAAGAATCGTGAACTGCAGTTAATGCGCTTGATGGATCACCCAAATGTAATTTCCCTGAAGCACTGCTTCTTTTCTACAACTAGCAGAGATGAACTTTTTCTGAACTTGGTTATGGAATATGTACCTGAGACGATGTATCGAGTTCTGAAACACTACAGTAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAACTTTACACATATCAAATCTTTAGGGGACTGGCATATATTCATACTGTACCAGGAGTTTGCCATAGAGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTCACACACCAAGTTAAGCTTTGTGATTTTGGAAGTGCAAAAGTTCTGGTCAAGGGTGAATCCAACATTTCATACATATGTTCACGTTACTATCGAGCTCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAGCTTCTTCTGGGCCAGCCATTATTTCCAGGAGAAAATCAGGTGGACCAACTTGTGGAAATCATTAAGGTTCTTGGTACTCCAACTCGAGAAGAAATTCGATGCATGAACCCGAATTATACAGATTTTAGATTTCCACAGATCAAAGCTCACCCATGGCACAAGGTTTTCCACAAGCGAATGCCTCCTGAAGCGATTGACCTTGCTTCAAGGCTTCTCCAATATTCACCAAGTCTTCGTTGTACTGCGCTGGAAGCATGTGCCCATCCTTTCTTTGATGAGCTTCGGGAACCTAATGCCAGACTACCCAATGGCCGCCCACTGCCCCTGCTTTTCAACTTTAAACAGGAATTGTCTGGAGCATCTCCTGAATTGATCAATAGGCTCATCCCAGAGCATGTTAGGCGGCAGAGTGGTCTGGGCTTCCCTCATCCGGCTGGTACATAG 2658 0.4579 METDDGYRRKAQIALITITVLTSLAVFSLLVAFSYYCYIRSKVSKRHKNQKDAGHNEKSDFTNLQVVADNGLQVYTFKQLRSATGGFSKSDVIGHGGFGLVYRGVLNDGRKVAVKFMDDAGKHGEDEFKTEVELLSRLHSPYLLTLLGYCSDNNHKLLVYEFMANGGLQEHLYPVSNSNVTPMKLDWETRLRIAFEAAKGLEYLHEHVSPPVIHRDFKTSNILLDKQFHAKVSDFGLAKLGSDKAGGHVSTRVLGTHGYVAPEYALTGHLTPKSDVYSYGVVLLELLTGRVPVDMERPPGEGVLVSWALPILTDREKIAKIMDPTLEGQCPMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRTHRILCRFGLYLLEKIFIISMTRYSNLQFLARRGSRARQTAPIIIFSQLAPTLFSRDAKERENRLRKREEQRGGEREREREREGEGVCVCLCDSHMASMPLGPHHHQPPQATAPQPPPPQAQGGNDPLKLAARRGSDMETDKEMSATVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPLLFNFKQELSGASPELINRLIPEHVRRQSGLGFPHPAGT 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0607 885 Pfam Protein kinase domain 545 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0607 885 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 509 874 - -
Dere08g0607 885 ProSitePatterns Protein kinases ATP-binding region signature. 551 575 IPR017441 GO:0005524
Dere08g0607 885 Gene3D Phosphorylase Kinase; domain 1 530 624 - -
Dere08g0607 885 Gene3D Phosphorylase Kinase; domain 1 45 162 - -
Dere08g0607 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Dere08g0607 885 MobiDBLite consensus disorder prediction 468 510 - -
Dere08g0607 885 Gene3D Transferase(Phosphotransferase) domain 1 625 872 - -
Dere08g0607 885 SUPERFAMILY Protein kinase-like (PK-like) 544 854 IPR011009 -
Dere08g0607 885 Gene3D Transferase(Phosphotransferase) domain 1 163 372 - -
Dere08g0607 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Dere08g0607 885 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Dere08g0607 885 SMART serkin_6 87 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0607 885 SMART serkin_6 545 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0607 885 MobiDBLite consensus disorder prediction 475 491 - -
Dere08g0607 885 FunFam Glycogen synthase kinase-3 beta 529 624 - -
Dere08g0607 885 SUPERFAMILY Protein kinase-like (PK-like) 70 363 IPR011009 -
Dere08g0607 885 CDD STKc_IRAK 93 366 - -
Dere08g0607 885 FunFam Serine/threonine-protein kinase PBS1 54 162 - -
Dere08g0607 885 CDD STKc_GSK3 540 832 IPR039192 -
Dere08g0607 885 FunFam Shaggy-related protein kinase kappa 625 872 - -
Dere08g0607 885 ProSiteProfiles Protein kinase domain profile. 545 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0607 885 Pfam Protein tyrosine and serine/threonine kinase 90 363 IPR001245 GO:0004672|GO:0006468
Dere08g0607 885 ProSiteProfiles Protein kinase domain profile. 87 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0607 885 FunFam Receptor-like serine/threonine-protein kinase ALE2 163 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0607 Dere-ChrDere08 9152235 9165820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0607 542 743 Receptor kinase-like Gene Family AT3G58690 29.439 1.97e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Dere08g0607 Pkinase 3.3e-63 CL0016