Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0603 ATGATGTCAAGATCGTATACAAATCTTTTGGATTTGGCTTCAGGGAATTTCCCAGCAATGGGTAGGGAGTTTAAAGAAAAGAAGCGGCTGCCAAGGGTTAAGAGTGTCCCTGGGATAATCTCAGAACTTGATGATGATCAGGCACAAAGTGTTTCTTCTGATAACCCATCAACTGTTTCTACAGATCGGATGATCGTTGTAGCGAACCAGCTGCCTTTGAAAGCTAAGCGAAAGGAGGACAATAAGGGGTGGAGTTTTAGTTGGAATGAAGATTCGTTGCTTTTCCAGCTTAAGGATGGATTTCCTGAAGACATGGAGGTTCTTTATGTTGGGTCGTTGCGAGTTGATGTTGATGCAGCTGAACAGGATGATGTGTCACAGTATTTATTGGATAAATTCAAATGTGTACCTACTTTTCTGCCCCCTGATGTTTTGACTAAATTTTATGATGGTTTCTGCAAAAGGCAGTTATGGCCACTGTTTCATTACATGTTACCATTTTCAACTGATAAAAGCCACCGTTTTGATCGCTCTTTGTGGGAAGCCTATGTGATGGCAAATAAGATATTTTCTCAGAAAGTAGTTGAGATAATAAACCCAGAGGATGATTATATATGGATTCATGATTATCATTTGATGGTGCTGCCAACTTTTATCAGAAGGCGCTTTAACAGGGTGAAAATGGGATTTTTTCTGCATAGCCCTTTTCCATCTTCAGAAATATATCGGACTCTTCCTGTCAGGGAAGAGATTCTTAAAGCCTTACTTAACTCTGATATCATTGGTTTCCACACCTTTGATTATGCTCGTCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCAAAAAGGGGTTACCTAGGATTGGAATATTATGGAAGGACTATCAGTATTAAGATTATGCCAGTTGGGGTTCACATGGGTCGTATTAAATCAGTCATGAGAATGGCAGATGAAGAGTCTAAAGCAAAGGAGCTGAAACAGCAATTTGAGGGAAAAACTGTCTTGCTTGGTGTTGATGATATGGACATTTTTAAAGGCATTGATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACATCCTAAATGGCAAGGAAGAGCTGTTTTGGTCCAGATAGTAAATCCTGCGAGGGGTAATGGTATACACCTAGAGGGCATACGGGCTGAAATACAAGAAAGCTGCAGTAGGATCAACAGAATATTTGGGCGGCCTGGTTATGAACCGATTGTTTTTATAGATAGATCAATTTTGATTGCTGAGAAAGTTGCTTATTATAGCATTGCTGAGTGTGTTGTTGTCACAGCCGTAAGAGATGGGATGAACCTTACTCCTTATGAATATATCGCTTGTAGACAGGAAGTATCTGGTTCTGAATCATGTACTAATGTCAATGGCTCAAAGAGCATGCTGGTGATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGGGCTATCCGTGTCAATCCATGGAATGTTGAAACAACTGCAGAGGCAATGAATGAGGCTATCTCAATGGCTGATGGAGAGAAGCAGTTGCGGCATGAAAAGCATTATCGATATGTTAGCACTCATGATGTGGCTTATTGGTCACGCAGTTTCTTGCATGACATGGAGAGGGCTTGCACTGACCTTCTGCGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAGAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCAAAGAGTAGGGCCATTTTGTTGGATTATGATGGTACTGTAATGCCACAGAACTCTATTAATAAGAGTCCAAGTCCAGAGGTCATCTCTATTTTGAATATACTTAGTGCAGACTCCAAAAATGTAGTTTTTATTGTTAGTGGGAGGGGTAGGGATAGCTTAAGTAACTGGTTTACTCCCTGCAAAAAACTTGGAATTGCAGCAGAACATGGGTACTTCTTGAGATGGTCCCAGAGTGAAGAATGGGAAATTTGCGGTAAGAGCTCTGATTTTGGCTGGATGCAGATTGCTGAACCTGTGATGAAACTATATACAGAGGCAACTGATGGTTCTAGCATTGAGAAAAAGGAAAGTGCTTTGGTCTGGCAATATCGGGATGCAGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTAGAGAGTGTTTTGGCTAATGAGCCTGTTGCTGTGAAGAGTGGTCAATTCATTGTTGAAGTAAAGCCTCAGGATGTGAGCAAAGGCTTAGTTGCTGAGAAGATATTTTCATCAATGGCTGTGCGAGGGAAACAGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGATATGTTTGAAATTATAAGTAGTTCAATCTCGGGAAATATTCTTTCTGCCAATAGTTCCGTATTTGCTTGCACAGTTGGACAAAAACCGAGCAAAGCTAAGTATTACTTGGACGATACAACTGAAGTCATAAGCATGCTAGAATCTTTGGCTGAAGAATCGGATTCTTCACCTGCATAG 2547 0.4099 MMSRSYTNLLDLASGNFPAMGREFKEKKRLPRVKSVPGIISELDDDQAQSVSSDNPSTVSTDRMIVVANQLPLKAKRKEDNKGWSFSWNEDSLLFQLKDGFPEDMEVLYVGSLRVDVDAAEQDDVSQYLLDKFKCVPTFLPPDVLTKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRSLWEAYVMANKIFSQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIKSVMRMADEESKAKELKQQFEGKTVLLGVDDMDIFKGIDLKILAMEQMLRQHPKWQGRAVLVQIVNPARGNGIHLEGIRAEIQESCSRINRIFGRPGYEPIVFIDRSILIAEKVAYYSIAECVVVTAVRDGMNLTPYEYIACRQEVSGSESCTNVNGSKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMADGEKQLRHEKHYRYVSTHDVAYWSRSFLHDMERACTDLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKSPSPEVISILNILSADSKNVVFIVSGRGRDSLSNWFTPCKKLGIAAEHGYFLRWSQSEEWEICGKSSDFGWMQIAEPVMKLYTEATDGSSIEKKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSSMAVRGKQADFVLCVGDDRSDEDMFEIISSSISGNILSANSSVFACTVGQKPSKAKYYLDDTTEVISMLESLAEESDSSPA 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0603 848 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 848 - -
Dere08g0603 848 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 549 - -
Dere08g0603 848 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Dere08g0603 848 CDD HAD_TPP 593 832 - -
Dere08g0603 848 Pfam Trehalose-phosphatase 595 829 IPR003337 GO:0003824|GO:0005992
Dere08g0603 848 CDD GT20_TPS 63 545 IPR001830 GO:0003824|GO:0005992
Dere08g0603 848 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Dere08g0603 848 Gene3D Glycogen Phosphorylase B; 56 316 - -
Dere08g0603 848 SUPERFAMILY HAD-like 592 840 IPR036412 -
Dere08g0603 848 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 841 IPR001830 GO:0003824|GO:0005992
Dere08g0603 848 Pfam Glycosyltransferase family 20 63 545 IPR001830 GO:0003824|GO:0005992
Dere08g0603 848 NCBIfam trehalose-phosphatase 589 840 IPR003337 GO:0003824|GO:0005992
Dere08g0603 848 FunFam Alpha,alpha-trehalose-phosphate synthase 317 529 - -
Dere08g0603 848 NCBIfam HAD-IIB family hydrolase 594 796 IPR006379 -
Dere08g0603 848 Gene3D Glycogen Phosphorylase B; 317 529 - -
Dere08g0603 848 Gene3D - 720 847 IPR023214 -
Dere08g0603 848 Gene3D - 591 693 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0603 Dere-ChrDere08 9126235 9130373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0603 1 846 Trehalose Biosynthesis Gene Families AT1G06410 77.922 0.0 1374