Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0598 ATGAATTACAGTAGCACCCAGGTCAGTTCATCATCTCGGAGGACCTGGAAATACGAAGTGTTTCTGAGTTTCAGAGGTGAGGATACTCGCAACAGTTTCACCGGTCATCTTTATGCTGCTCTTCAACGAAAAGGTATATTTACCTTCAGGGATGACAAAAGGCTCAAAAAAGGAGATTCCATTTCAACCGAGCTCCTCAAAGCAATTAAGCAATCCCGGATTTCTATTGTTGTCTTCTCTTTAAAATATGCTGATTCAACATGGTGCTTGGAGGAATTGGTAAAGATCTCTGAGGGAATTAGCGAACCGGGATACACCGTGGTTCCAATTTTTTACGATGTCGATCCATCTGATGTGCGAAAGCAGAGTGGGAAATTTAAAGAAGCCTTCGATAAACATGAAAAAAACAGTGATTATCAGGAGAAGATACCGAGATGGAGGCTAGCGTTGACTCAAGTGGCTAATCTCTCTGGTTGTGATGTACGGAATAAATCAGAGGCAGAAGTTATTGATAACATCATTAAAGATGCAATAGACAAATTGGGTCATAAATTCTCAAGTCTGGCTGATGATCTAGTTGGGATGCAATCTCGTGCAGAAGCATTGGAAAACCTTCTAGATTTAGATACAGATGATTTTCGAGCTGTAGGGATTTGGGGGATGCCCGGAATAGGGAAGACTACTCTAGCTGCAGTTGTGTACGATAGGATCTCTCACCGATTTGATGCTTGCTGTTTCCTTGCCGATGTAAGTAAAGTTTATAAGGGTCCTGGTCTTGTCCGTCTACAAGAGCAACTCCTTAGTGAAACACTACAGGAAAAAATAGAGATATGGGACGACCACAAGGGAATCGGTTTAATAAGTTCTAGGCTTCGCCACCTTAAAACTCTTATTGTTGTTGATAATGTTGATCATGCAGATCAATTAGAGAAATTGGTTGGAAAGTTTGGAAAGTCTGCGCGGTTTGGTACAGGGAGTAGAATCATCATAACAACTAGAGATGAGCATATCCTAAGACATCATGAAGTGGATCAGATTTACAAGGTTGAACTGTTAAATGATGATGAAGCTCTTCAACTTCTTTGTAGAAGAGCCTTCAAACGTGATGATCCCTTGAGTAATTTTCAAGGGATGACCCATAGTCTGCTGCAGTATGCTAAAGCCCTTCCATTAGTAATCAAAGTGTTAGGTTCGTTTCTGTTTGGACTAGAAGAATCAGAGTGGAGCAGTCAGTTACAAAGATTGAAAGAAAATCCTAACCAAGAGGTTATGGGAGTGCTTGAAACCAGTTTTGTTCGGCTTGATAAAAAGGATAGGGATATATTTGTAGATATTGCTTGTTTCTTTAAGGGAGAAGACGAGAACTATGTCATGAAAATTCTAGACCATTGTGGATTCAATCCTGCGATTGGAATCAGAACTCTACGTGATAAATCACTCATAAGCATTGTCAATGGGGCACTCTGGATGCATGACATGCTGCAAGAACTGGGATGGAAAATTGCCCGGGGAGACTTTCCTGAAGAGCCAGCAAAGTGGAGTAGGCTGTGGTTGTACAAAGACCTTCAAGTTGTAAATACAGGAACGGAAAATGTTGAAGCCATTGTCTTGAACCGGGAAGGTCGGCAAGAGACTCCATTGAAGGCTGAAGCTTTATCACAAATGAGCCGCCTCAGACTACTCATATTCCCTGATGTTGAATTTTCAGGAAACCTCAATAATCTTTCCAATGAGTTACGGGTTCTTTCATGGCATAAATTTCCTTTCAGCTCTTTTCCATCAAATTTTGAGCCAGCTAGACTTGTTGAATTGATCATGCTTGACAGCAATATAAGACAACTATGGGGAGGCATAAAGACTCTGCCCAACTTGAGAAGCATAGATCTACGAGGCTCTAAAAATCTAGTCAAGACGCCAAATTTTAGAGGGATACAGAATCTTGAGAGGCTAGACCTTGAAGGATGTACTGGATTATTGCAGGTTGATCCATCTATTGGAGTTCTTGTAAAGCTCACATTCCTGAATCTGAGAAACTGTGATCATTTAATCAGTATCCCAAGCACCTTATTTCTTTTAAGTTCTCTTGAAATTCTGAACCTTTCTGGCTGTTCAAAACTTGCGAGACGTTTGAACTTTGAAGGACCTCGATAG 2151 0.4086 MNYSSTQVSSSSRRTWKYEVFLSFRGEDTRNSFTGHLYAALQRKGIFTFRDDKRLKKGDSISTELLKAIKQSRISIVVFSLKYADSTWCLEELVKISEGISEPGYTVVPIFYDVDPSDVRKQSGKFKEAFDKHEKNSDYQEKIPRWRLALTQVANLSGCDVRNKSEAEVIDNIIKDAIDKLGHKFSSLADDLVGMQSRAEALENLLDLDTDDFRAVGIWGMPGIGKTTLAAVVYDRISHRFDACCFLADVSKVYKGPGLVRLQEQLLSETLQEKIEIWDDHKGIGLISSRLRHLKTLIVVDNVDHADQLEKLVGKFGKSARFGTGSRIIITTRDEHILRHHEVDQIYKVELLNDDEALQLLCRRAFKRDDPLSNFQGMTHSLLQYAKALPLVIKVLGSFLFGLEESEWSSQLQRLKENPNQEVMGVLETSFVRLDKKDRDIFVDIACFFKGEDENYVMKILDHCGFNPAIGIRTLRDKSLISIVNGALWMHDMLQELGWKIARGDFPEEPAKWSRLWLYKDLQVVNTGTENVEAIVLNREGRQETPLKAEALSQMSRLRLLIFPDVEFSGNLNNLSNELRVLSWHKFPFSSFPSNFEPARLVELIMLDSNIRQLWGGIKTLPNLRSIDLRGSKNLVKTPNFRGIQNLERLDLEGCTGLLQVDPSIGVLVKLTFLNLRNCDHLISIPSTLFLLSSLEILNLSGCSKLARRLNFEGPR 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0598 716 PRINTS Disease resistance protein signature 386 400 - -
Dere08g0598 716 PRINTS Disease resistance protein signature 690 706 - -
Dere08g0598 716 PRINTS Disease resistance protein signature 215 230 - -
Dere08g0598 716 PRINTS Disease resistance protein signature 290 304 - -
Dere08g0598 716 Pfam NB-ARC domain 202 419 IPR002182 GO:0043531
Dere08g0598 716 Gene3D - 14 183 IPR035897 -
Dere08g0598 716 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 708 IPR044974 GO:0006952
Dere08g0598 716 SUPERFAMILY L domain-like 507 705 - -
Dere08g0598 716 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Dere08g0598 716 Gene3D Ribonuclease Inhibitor 527 712 IPR032675 -
Dere08g0598 716 SUPERFAMILY "Winged helix" DNA-binding domain 422 522 IPR036390 -
Dere08g0598 716 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Dere08g0598 716 Gene3D - 184 349 IPR027417 -
Dere08g0598 716 Pfam TIR domain 17 191 IPR000157 GO:0007165
Dere08g0598 716 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 183 - -
Dere08g0598 716 Gene3D - 351 435 IPR042197 -
Dere08g0598 716 SMART till_3 17 156 IPR000157 GO:0007165
Dere08g0598 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0598 Dere-ChrDere08 9072368 9075025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0598 18 707 WRKY Transcription Factor Family AT4G12020 32.451 5.39e-92 313