Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0596 ATGATTCGGAAGGGCCTCAAGTATCTTTCTAAATCTTTACTATATGTTTCATGGTATGAGTACCCTTTCGTTTGTTTGCCATCAAGTTTTGAGTTGCATAAACTCGTGGAATTGATCATGCCTGATAGCAGCATCACACAGTTATGGGAAGGCATAAAGATGCTCCCCAACTTGAGAGTGATGGACCTCCGTGATTTAAGAGATCTAATCAAGATGCCAGATTTGAGAGGACAGGCTAGACCTTGA 246 0.4146 MIRKGLKYLSKSLLYVSWYEYPFVCLPSSFELHKLVELIMPDSSITQLWEGIKMLPNLRVMDLRDLRDLIKMPDLRGQARP 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0596 81 Gene3D Ribonuclease Inhibitor 3 79 IPR032675 -
Dere08g0596 81 SUPERFAMILY L domain-like 8 72 - -
Dere08g0596 81 Pfam Leucine Rich Repeat 34 53 IPR011713 -
Dere08g0596 81 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 77 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0596 Dere-ChrDere08 9061151 9061570 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0596 4 75 WRKY Transcription Factor Family AT4G12020 37.500 1.27e-07 45.4