Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0594 ATGGTTAAGATTTTACTCGTCCGTCTGACATTTCAGTCCTCCGGAGCACCGTATATGACTGCTATTTGCCATCCACAGCCACGGATCAAACATTTTCAAAGCAAACCAGAGGCAGGAGTTATTGATCGCATCGTTAACTATGCAATAAGCATATTGGCCCATCATAAATTATCAAGTTTTCCTGTTGGCCTAGTCGGGATGGAATCTCGTGCAGAAGAATTTATAAAGCTTCTAAATTTGGAGTCCGGCAGCGTTCAAGTTGTGGGCATTTGTGGGATGAGTGGAATAGGGAAGACGACTCTTGCCAGAGTTGTTATTGAGGCCATCTTTCACCAATTTGATGCTTCTTGTTTCCTTTCCAATGTTAGTGAAATTTCTTCAAGGCATAATGGTCTATCCCATCTACAAGAAAAACTTATTCGTCATACTCTGGAGCTTGAAGATCTAAAGATAAGAGGAGAGAAGATAAGTGATGTGAAAGAAATCCTAAAGCTTTACAGATTTGATCCTGATATTGAAATTAAAGCAAGTGTTGAAGCCATAGTCTTGAACCAGGATGATTTGGAAGGGCCTCCATTGAGAGCCAACGTTTTTTCAAAAATGCCCCACCTTAGACTGCTCATAATTCGTAATGTGAGGTTTTCGGGAAGCCTCAAGTATCTTTCTAAATCTTTACTATATGTTTCATGGTATAAGTACCCTTTCGCTTGTTTGCCATCAAGTTTTGAGTTGCATAGACTCGTGGAATTGATCATGCCTGATAGCAGCATCACACAGTTATGGGAAGGCATAAAGATGCTCCCCAACTTGAGACTGATGGACCTCCGTGATTCAAAAGATCTAATCAAGATGCCAGATTTGAGAGGACTTCCAAATCTTGAGAGGCTAGACCTTGAAGGGTGTACTGTATTGTTGCATATTGATCCATCTATTGCAGTTCTTACAAAGCTCACGTTCTTAAATTTGAGAAACTGCACAAGTTTGATTAGTATCCCAAACAACTTATTCGGTCTAAGTTCAATTCAAATTCTTAATCTAGCTGGCTGCTCCAAACTTGCAGAATGTTTAAATTTTAACCCCTTGAGGAGCTCCTTAGAAGTGAAAGACTTGGTGTTGAAAGATGTGCCTGAAGAGCTTGTGCCAGGATCAGAGAGCTCAAACACAGTAACGGGCGGGTTCAGGAGGATTACGCTAAACTTTGGGAAGTTCTGGCAACCTATGAAGCTCAGAGACCGTGTTGGGGCCTTGAAGATGCTTTGTTCATATACCAGGTCGAATAATTTTCTTAGTCTTGGTTTAAACCTTCTTTAA 1311 0.4073 MVKILLVRLTFQSSGAPYMTAICHPQPRIKHFQSKPEAGVIDRIVNYAISILAHHKLSSFPVGLVGMESRAEEFIKLLNLESGSVQVVGICGMSGIGKTTLARVVIEAIFHQFDASCFLSNVSEISSRHNGLSHLQEKLIRHTLELEDLKIRGEKISDVKEILKLYRFDPDIEIKASVEAIVLNQDDLEGPPLRANVFSKMPHLRLLIIRNVRFSGSLKYLSKSLLYVSWYKYPFACLPSSFELHRLVELIMPDSSITQLWEGIKMLPNLRLMDLRDSKDLIKMPDLRGLPNLERLDLEGCTVLLHIDPSIAVLTKLTFLNLRNCTSLISIPNNLFGLSSIQILNLAGCSKLAECLNFNPLRSSLEVKDLVLKDVPEELVPGSESSNTVTGGFRRITLNFGKFWQPMKLRDRVGALKMLCSYTRSNNFLSLGLNLL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0594 436 Pfam NB-ARC domain 75 155 IPR002182 GO:0043531
Dere08g0594 436 SUPERFAMILY L domain-like 194 363 - -
Dere08g0594 436 Gene3D Ribonuclease Inhibitor 168 388 IPR032675 -
Dere08g0594 436 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 162 IPR044974 GO:0006952
Dere08g0594 436 Coils Coil 132 152 - -
Dere08g0594 436 Gene3D - 47 167 IPR027417 -
Dere08g0594 436 PRINTS Disease resistance protein signature 87 102 - -
Dere08g0594 436 PRINTS Disease resistance protein signature 336 352 - -
Dere08g0594 436 Pfam Leucine Rich Repeat 247 265 IPR011713 -
Dere08g0594 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 153 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0594 Dere-ChrDere08 9015143 9019217 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0594 196 379 WRKY Transcription Factor Family AT4G12020 38.500 2.75e-27 113