Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0592 ATGCAATCTCGGGTGGAAGCATTAGAAAAGCTTTTGGATTTAGGCTCAAAACATCATGTTCGAAGGGTAGGGGTTTGTGGGATCGATGGAATAGGGAAGACCACTGTTGCTGGAGTTGTTTATGACAGGATCTCTCATCGATTTGATGCTTCTTGCCTCCTTGCCGATGTAAGCAGAGTTTCCCAGGTTTCAGGTATTATCCGTCTTCAAGAAAAGCTTCTTTCTGATATTCTCAAGGAAAATCTGGAGATAAGTGACGATCAAAAGGGAACCAGTTTAATAAGCACTAGACTTGGCCACCTTAGAAGTCTTGTAGTTTTGGATAACGTTGATCAATCAACTCAATTAGAGAAATTGGCTGGGGAAAATGATTGGTTTGGTGCAGGGAGTAGAATCATCATAACAAGCAGAGATGAGCATGTTCTAAGATGGTGTGGAGTGGATAAATTTTTCGAGCTTGAACAATTGGACAAGGATGAGGCTCGACAACTTTTCTGTAGAATTGCCTTCAAATGTGATTATCCCAAAAGAGATTATGAGGAGCTTACTGATAATGTACTAGAATACGCAAAAGGTCTTCCATCAGCAATTAAATCATGGGGTTCGTACTTGTTTAACCAAAGTGTCTCAGAATGGAGAAGTGCCGTAGCTAAACTGCAAAAAATTCCTAAGCACATGATAGTGATGATGCCTGGAAAAAAAATTTTTGATAGACTAATGGACTTGGAAAAGGAAATATTTTTAGATATTGCGTGCTTTTTTAATGGGGAGAGCATTAATTACGCAACTGAAAGAGTTGAAGCCATGGTGTTGAATCGTGAAGAAGAAGAAATTGTTCCATTGAGGGTCGAAGCATTATCAAGAATGAGCTGCCTTAGACTTCTCATATTTCATAATGTAAACTTTTCAGGACACCTCAAATATCTTTCTAATAAGTTGCGATATGTGTCATGGCATAAATATCCTTTTACTCATTTACCATCAAGTTTTGAACCTCATAGACTTGTGGAATTGATCATGCCTGATAGCATTATCACAGAGTTATGGGAAGGCATAAAGGTGTGA 1065 0.3859 MQSRVEALEKLLDLGSKHHVRRVGVCGIDGIGKTTVAGVVYDRISHRFDASCLLADVSRVSQVSGIIRLQEKLLSDILKENLEISDDQKGTSLISTRLGHLRSLVVLDNVDQSTQLEKLAGENDWFGAGSRIIITSRDEHVLRWCGVDKFFELEQLDKDEARQLFCRIAFKCDYPKRDYEELTDNVLEYAKGLPSAIKSWGSYLFNQSVSEWRSAVAKLQKIPKHMIVMMPGKKIFDRLMDLEKEIFLDIACFFNGESINYATERVEAMVLNREEEEIVPLRVEALSRMSCLRLLIFHNVNFSGHLKYLSNKLRYVSWHKYPFTHLPSSFEPHRLVELIMPDSIITELWEGIKV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0592 354 Gene3D - 155 238 IPR042197 -
Dere08g0592 354 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 250 IPR027417 -
Dere08g0592 354 Pfam Leucine Rich Repeat 335 353 IPR011713 -
Dere08g0592 354 Pfam NB-ARC domain 4 222 IPR002182 GO:0043531
Dere08g0592 354 PRINTS Disease resistance protein signature 97 111 - -
Dere08g0592 354 PRINTS Disease resistance protein signature 22 37 - -
Dere08g0592 354 PRINTS Disease resistance protein signature 190 204 - -
Dere08g0592 354 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 348 IPR044974 GO:0006952
Dere08g0592 354 Gene3D - 1 148 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0592 Dere-ChrDere08 9001775 9003162 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0592 298 353 WRKY Transcription Factor Family AT5G45050 44.828 4.52e-08 53.1