Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0565 ATGGTCTCCAAGAACCAGAACCGCCCTCCATTATCACTCACATCCTCACCTTCAACCCCTTCTACAAATGTACCATCTTTTCTCATTTCACATTACATGATTTCAATTCTTTCCTGGAAGTATATGGGTGATCAGGTCCTCGTAGAACAACAAGTTGGAGAAGGAAAAATGGTGGGAACTCCGATTAATGGAAGAACAAGGCAAGCTTTTACGGTTGTTAATGGCGGGCATGATCTTAGCCCGAATAGTGCCCCGCCAAGCAATGTCGGGTCGGATTGTGGCATTATAGAGTTCACAAGGGAGGATGTGGAAGCATTGCTGAATGAGAAAGCCAAAAGAAAGGACAGATTTAATTATAAGGAAAGATGTGAAAATATGGTGGATTATATAAAGAGGCTTAAGGTTTGCATCAGATGGTTCCAAGACCTTGAGTTGAGCTACTCGCTAGAGCAAGAGAAGTTGAAAAATTCCTTGGAATTAACCCAGCAAAAATGCATAGAAATTGAGCTGCTACTTAAGATCAAGGAAGAAGAATTGAATTCTATTATTGCGGAAATGAGAAGGAATTGCACTTCTTTGCAAGAAAAATTAATCAAGGAAGAATCAGAGAAATCGGTGGCAGTGGAAGCTCTTGCCAAAGAGAGAGAGGCTAGGCTTGAAATTGAGAGGTCACAGACTACTCTGTCAGATGACCTTGAAAGAGCTCAAAGAGAGCTCCAAAGTGCAAATCAGAAGATATCATCACTCAATGACATGTACAAGCGGTTACAGGATTACATTACGAGCTTACAGCAATACAATGAAAAGCTTCATACAGAGCTTTCTTCGGCTGAAGATGAACTTAAGCGTGTAGAGAAAGAGAAGGCTACTATAGTGGAGAACCTCACCATGTTAAGGGGTCAACTTACTTTGTCCATTTCTTCTCAAGAAGAGGCTGTGAAACAGAAGGATGCTTTGGCTAGTGAAATTTCATCTCTTAGAGGAGAGTTGCAACAAGCAAGAGACGATCGAGACCTCCAATTATCTCAAGTGCAAACCATAACTTCTGAGTTAGTGAAATTTAAAGAATCTACAGAAAAGTCTAGCATTGAACTGAATAACTTGACTAAAAAAACAAACGAACTGGAGGCAAAATGTTCTTTGCAAGAAAACCAGATAAAGGCATTGCAGGAGCAACTAACAACTGCAGAAAGTAAAGTACAGGTATCTGATATATTTTCACTTGAGACAAGAACAGAATTTGAAAGTCAACAGAAACTTGTAGAGGTATTACAAAGACGTTTGGCTGATGCAGAATTTAAACTTATAGAAGGGGAGAAGCTGCGGAAAAAATTACATAACACCATTTTGGAGTTAAAAGGGAATATCCGCGTATTTTGTAGAGTGCGACCTTTTTTGCCTGATGAAAGTTGTAATGCAGAAGGCAAGATTATCTCTTACCCCACATCAATGGAAGCCTCTGGTCGTGGCATTGATTTAACCCAAAGTGGTCAAAGACATTCTTTTACATTTGATAAAGTTTTTGCACCTGACACATCACAAGAAGAAGTTTTCGTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGTATCTTTGCCTATGGTCAAACAGGGTCAGGGAAAACCTATACCATGATGGGGAAGCCAGGACATCCAGGGGAAAAGGGCTTGATACCTCGTTCATTAGAGCAGATATTTCAAACAAGGCAGTCTCTGCTATCCCAAGGCTGGAAATATGAATTGCAGGTGTCAATGCTGGAAATATATAATGAAACCATTCGCGATCTGTTATCTACAAATAAATCGTCCTTAGATGTAACTCGTGTTGAAAATGGTACTCCTGGAAAGCAATATGCAATAAAACATGATGCCAATGGAAATACACATGTTTCTGATCTTACAGTAGTGGATGTTCACAGTGCTAAAGAGGTTGCATTTCTCCTAAATCAAGCAGCAAATAGCAGGTCTGTAGGAAAAACCCAGATGAATGAACGATCATCAAGAAGTCATTTTGTGTTCACTCTTCGAATATATGGTGTCAATGAGAGCACTGACCAACAAGTACAAGGTGTACTGAATCTTGTTGATCTTGCGGGGAGTGAGCGTCTTTCAAAGAGTGGATCAACAGGGGACCGACTGAAAGAAACTCAAGCAATCAATAAAAGTTTGTCATCATTAAGTGATGTTATATTTGCCTTGGCAAAGAAGGAGGATCATGTGCCATTCAGGAACTCAAAGCTTACATATCTGCTACAGCCTTGTCTTGGAGGAGACTCAAAGACACTAATGTTTGTGAACATATCTCCTGAGCCTTCTTCAGTTGGAGAGTCACTATGCTCGCTTCGATTTGCTTCCAGAGTAAATGCTTGTGAGATTGGGACACCTCGGCGACAGACCAATGGACGCCTGACAGACTCACGCTTGAGCTACTTCTAA 2451 0.4043 MVSKNQNRPPLSLTSSPSTPSTNVPSFLISHYMISILSWKYMGDQVLVEQQVGEGKMVGTPINGRTRQAFTVVNGGHDLSPNSAPPSNVGSDCGIIEFTREDVEALLNEKAKRKDRFNYKERCENMVDYIKRLKVCIRWFQDLELSYSLEQEKLKNSLELTQQKCIEIELLLKIKEEELNSIIAEMRRNCTSLQEKLIKEESEKSVAVEALAKEREARLEIERSQTTLSDDLERAQRELQSANQKISSLNDMYKRLQDYITSLQQYNEKLHTELSSAEDELKRVEKEKATIVENLTMLRGQLTLSISSQEEAVKQKDALASEISSLRGELQQARDDRDLQLSQVQTITSELVKFKESTEKSSIELNNLTKKTNELEAKCSLQENQIKALQEQLTTAESKVQVSDIFSLETRTEFESQQKLVEVLQRRLADAEFKLIEGEKLRKKLHNTILELKGNIRVFCRVRPFLPDESCNAEGKIISYPTSMEASGRGIDLTQSGQRHSFTFDKVFAPDTSQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPGHPGEKGLIPRSLEQIFQTRQSLLSQGWKYELQVSMLEIYNETIRDLLSTNKSSLDVTRVENGTPGKQYAIKHDANGNTHVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNERSSRSHFVFTLRIYGVNESTDQQVQGVLNLVDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPEPSSVGESLCSLRFASRVNACEIGTPRRQTNGRLTDSRLSYF 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0565 816 Pfam Kinesin motor domain 461 793 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere08g0565 816 Gene3D Kinesin motor domain 404 797 IPR036961 -
Dere08g0565 816 Coils Coil 96 116 - -
Dere08g0565 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 793 IPR027417 -
Dere08g0565 816 ProSitePatterns Kinesin motor domain signature. 695 706 IPR019821 GO:0003777|GO:0005524|GO:0007018
Dere08g0565 816 PRINTS Kinesin heavy chain signature 745 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere08g0565 816 PRINTS Kinesin heavy chain signature 531 552 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere08g0565 816 PRINTS Kinesin heavy chain signature 696 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere08g0565 816 PRINTS Kinesin heavy chain signature 665 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere08g0565 816 MobiDBLite consensus disorder prediction 1 21 - -
Dere08g0565 816 Coils Coil 316 336 - -
Dere08g0565 816 SMART kinesin_4 453 803 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere08g0565 816 CDD KISc_C_terminal 453 797 - -
Dere08g0565 816 FunFam Kinesin-like protein 401 797 - -
Dere08g0565 816 Coils Coil 176 203 - -
Dere08g0565 816 Coils Coil 358 399 - -
Dere08g0565 816 Coils Coil 225 294 - -
Dere08g0565 816 PANTHER KINESIN-LIKE PROTEIN KLP-3 309 802 IPR027640 GO:0003777|GO:0007018
Dere08g0565 816 ProSiteProfiles Kinesin motor domain profile. 455 795 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0565 Dere-ChrDere08 8682502 8687554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0565 231 792 Calmodulin-binding Proteins AT5G65930 33.831 4.10e-80 279