Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0563 ATGGCAATTCAACTATTTATGGGTGTCACAAAGGCTAGCTTTTGTGTTCTACTGTTTCTTCTACTTATATCAGCAGGTAGCTTGAAAGAAAGCGAGGAAACCCGAAATGACTTCCTTAGCCAGCTACTCGATCCGGCATCTGGCTTGTTAGATGACAACACGTTGTCCTCTCCCTCCCCTACCTCTTCTCGGAGAGCGATTTGTTGGGGGGATTTACTAATCTTTAAAGTTCGGTCTCGATTTTGTGTTTCTTATCCTGATTGTATTTGTCTGTCGTGGCCTTTCTGTAAAGCCCAAAAACCTGCTTCGACCCCAATAAGTGGCCAGTGGTGGTCTTTCACTGATTTGACACTAGGCCGCTGCCATGGATCTCAGAACTGTCAGTCAGTGGTATTGAAATATTGGAAGCTATCTTATGGATTCAAATTACATCCAAGTGTTTCTGATCTCTTCTACCCGTCTGACAGAGTCTTAGTAGTTATCAGTTATACTAATTTAAGAGCTGAGCAATTATGGTCCACATGCTGTGTAGATTTGACTCACTTAAGGGAAGAGGTAGAAGATCTTGACTGGTGCTTCCCACAAGAATCATCCAGCAGCACTGATGAAAATTCAGAAATTCAATCTATAGTACGAGAAAACATCCAAAAATTGATTAATGTTCACCATCCTCGGTTGAAGCAAATTTTTCTTCACTGTTTGAGAAAGAATGATCTTCCATTTCGTGTCTCTGGAGAAGAGGATGATTCTAAGACATGGCATGCCTCATTTATAAAATCAATTTTTTTCAGATCCAGTATTCCTAGAAGAAATTTAGGTCATGAACTGCTTCAGCAAATATCAGAAGCACCTAGCCCAGGTCCTGCATTTATATCACCAACTCTAAGTCCTGCTCCATCACCTTCCATCCCTCAAGTTCCTGAATCTTGGCCTAATGCTTCATCACCAAAAAAAGCATTCTTTCCAGAGCTGCAGCCTCCAGCTGCAGAGGATACCTCTGCAAATCCATCTTCTCAGGCAGATAGGAAAAGTAATCATAATAGAACAGTTGTTCTTGCTGTAGTTATAACTGCTTTGGTGACATTTGTAGTTGCAGCACTGCTCTTTTTATGCTGTAGTAGGTATTGTAGGACTCGTCGAGTTAAACAAAACGATGAGAGGCCCCTTCTCAACTTGAGCTTGAGTGACTACTCTATTGGTTCTTCCCATTATACTTTTGGAAATTCAACAAAAGAGGAGAAATTTGGGTTTCAGTCATCTAGTCATAATGTGGATGACCACAAAATAATATCATCTCTGAATGCCAATTCTCAAGGTGGCTCTAATAATTTCCATACCACAGTACAGGAAAGTCAATCAATAGGAGCTGTTGGTGCTGCTTCCAGATCGTCACTGGAACTGAAACCTCCTCCTGGCAGGGTGGGAACCATCTCTTCTGGATTGCCTCCTTTAAAACCTCCTCCTGGTAGACTGAGCCCCCTTCCCCCTGAACCACCTTCTTTTAAACCTAATAATACTACTCCTCCTCCTCCTGCTACTCTGCCTCCTGCACCCCCACAACCTGCAAAACCTCATTCTGATACTGGACCTCCTGCACCCCCACAACCTGTGAAACATCATTCGAGTGCCAGCGGAGGTCCACCTCCTGGACCTCCACCACCACCTCCACCACCTGGTGCCAAACCAGGCAGTCATCCACCACCACCTCCTCCTCCTAAGAGTGGTATAGCTCCTCCTCGACCTCCTCCACCTATTGGTCCAAAGAAAGCTCCACAGAATGTGGGATCTGGTTCAAAAGGAGAAGCTGACGCTCCCAAAGCCAAGCTAAAACCTTTTTTCTGGGATAAGGTCCAAGCCAACACAGATCAATCAATGGTTTGGAATCAGATCAAATCGGGATCATTCCAGTTTAATGAAGAGATGATAGAGACACTTTTTGGCTATAATGCTGTGGATAAAAACAAAGGTGATCCAAAGAAAGAGTCATCTTCCCAAGACCCTTCAACACAGTATATCCAGATAATTGACAGGAAAAAAGCACAGAATTTGTTGATTTTATTGCGAGCCTTGAATGTGACAACAGAAGAAGTTTTTGACGCACTTCATGAGGGTTCTTTGAAACTAGCATTGTATTCTTTGCAGATGGAGAGGGTTGGTTATGGTGAGCACCTATTAGATATTTACCATGACCTAAAAGATGCCATCAGCTTTTGCAGTCAATTTGAAGTTCTACAACCTTGGAGTGTTGGTCTTGGATATGTTATCGTGATCAATTTGGACAGCTGCATTGTTATCTATAAAGATTTTCTGAGAAATGAGCTTCCCTCAGAATTTCTTCAAACCTTGCTGAAGATGGCGCCAACATCTGAGGAAGAACTTAAGCTTAGACTCTTCAGTGGCGAAATATCTCAACTTGGGCCTGCAGACCGATTCTTAAAAGCCCTGGTTGACATTCCATTTGCTTTTAAACGAATGGAAGCATTGCTTTTCATGGGTACTCTTCAAGAGGAGCTCACTGCTACTAAGGAGTCATTTGCAATTTTGGAGGTTGCATGTAAGGAGCTAAGAAACAGTCGGCTATTCCTCAAGCTTCTAGAAGCTGTTCTTAAAACTGGAAACCGTATGAATGATGGAACATTCCGTGGTGGTGCACAAGCATTTAAACTTGATACGCTACTGAAATTGTCTGATGTAAAAGGAACAGATGGAAAGACTACACTGCTACACTTTGTAGTCCAAGAGATAATCCGCTCTGAGGGCAAAAGAGCTGCTCGAATTGCAAAAGAAAACCAGAGCTCCTCTGGTATTAAAACAGATGGCCTTTTTGAGGCTGATGAAAGGGAAGAACACTATCATGATCTTGGTCTCCAGGTAGTTTCACATTTGAGCAGTGAGCTAGAGAATGTCAAGAAAGCAGCAACTATGGATGCTGATAGCTTAACAGGAACTACTGCCAAACTTGGCCATGGTTTCATTAAAACCAGAGATTTCGTGAAAACTGACTTGAAGAGTATAACGGAAGATAGTGGATTTTATCAGACAGCAAGGAGTTTTGTGCTGGATGCTGAGAGTGATATCACGAGTCTGCTGGAAGAAGAGAAGAAAATAATGGCTCTGGTGAAGAGCACTGGTGATTATTTTCATGGGAATGCTGGGAAAGATGAGGGATTACGGTTGTTTGTGATAGTACGAGACTTCTTGATAATGTTGGATAAGGTATGCAAGGAGGTGAGAGATGCACGGAAGAAGCCACTCAAAGTTCAAAAACACGAGACTTCGAAAGCTTCATCTTCCCCTGATGTTCGTCCGCCACCTGATTTTCGTCAGCTGCTGTTTCCAGCCATTGCAGATAGGCGCATGAAAGACTATAGTTCAGATGATGAGAGTCCATAG 3393 0.4285 MAIQLFMGVTKASFCVLLFLLLISAGSLKESEETRNDFLSQLLDPASGLLDDNTLSSPSPTSSRRAICWGDLLIFKVRSRFCVSYPDCICLSWPFCKAQKPASTPISGQWWSFTDLTLGRCHGSQNCQSVVLKYWKLSYGFKLHPSVSDLFYPSDRVLVVISYTNLRAEQLWSTCCVDLTHLREEVEDLDWCFPQESSSSTDENSEIQSIVRENIQKLINVHHPRLKQIFLHCLRKNDLPFRVSGEEDDSKTWHASFIKSIFFRSSIPRRNLGHELLQQISEAPSPGPAFISPTLSPAPSPSIPQVPESWPNASSPKKAFFPELQPPAAEDTSANPSSQADRKSNHNRTVVLAVVITALVTFVVAALLFLCCSRYCRTRRVKQNDERPLLNLSLSDYSIGSSHYTFGNSTKEEKFGFQSSSHNVDDHKIISSLNANSQGGSNNFHTTVQESQSIGAVGAASRSSLELKPPPGRVGTISSGLPPLKPPPGRLSPLPPEPPSFKPNNTTPPPPATLPPAPPQPAKPHSDTGPPAPPQPVKHHSSASGGPPPGPPPPPPPPGAKPGSHPPPPPPPKSGIAPPRPPPPIGPKKAPQNVGSGSKGEADAPKAKLKPFFWDKVQANTDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNKGDPKKESSSQDPSTQYIQIIDRKKAQNLLILLRALNVTTEEVFDALHEGSLKLALYSLQMERVGYGEHLLDIYHDLKDAISFCSQFEVLQPWSVGLGYVIVINLDSCIVIYKDFLRNELPSEFLQTLLKMAPTSEEELKLRLFSGEISQLGPADRFLKALVDIPFAFKRMEALLFMGTLQEELTATKESFAILEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGKRAARIAKENQSSSGIKTDGLFEADEREEHYHDLGLQVVSHLSSELENVKKAATMDADSLTGTTAKLGHGFIKTRDFVKTDLKSITEDSGFYQTARSFVLDAESDITSLLEEEKKIMALVKSTGDYFHGNAGKDEGLRLFVIVRDFLIMLDKVCKEVRDARKKPLKVQKHETSKASSSPDVRPPPDFRQLLFPAIADRRMKDYSSDDESP 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0563 1130 MobiDBLite consensus disorder prediction 290 306 - -
Dere08g0563 1130 MobiDBLite consensus disorder prediction 545 589 - -
Dere08g0563 1130 MobiDBLite consensus disorder prediction 481 537 - -
Dere08g0563 1130 PANTHER FORMIN-RELATED 529 1118 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dere08g0563 1130 SUPERFAMILY Formin homology 2 domain (FH2 domain) 567 1087 - -
Dere08g0563 1130 Gene3D Formin, FH2 domain 604 1100 IPR042201 -
Dere08g0563 1130 ProSiteProfiles Formin homology-2 (FH2) domain profile. 599 1096 IPR015425 -
Dere08g0563 1130 SMART it6_source 599 1085 IPR015425 -
Dere08g0563 1130 MobiDBLite consensus disorder prediction 1084 1107 - -
Dere08g0563 1130 Pfam Formin Homology 2 Domain 601 1070 IPR015425 -
Dere08g0563 1130 MobiDBLite consensus disorder prediction 455 607 - -
Dere08g0563 1130 MobiDBLite consensus disorder prediction 330 344 - -
Dere08g0563 1130 MobiDBLite consensus disorder prediction 288 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0563 Dere-ChrDere08 8660137 8666852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0563 576 731 FH2 protein (formin) Gene Family AT5G54650 51.705 6.45e-41 161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0563 08 8660137 8666852 Dere07g0182 07 3836125 3843198 CCT
Dere08g0563 08 8660137 8666852 Dere08g0563 08 8660137 8666852 ECH