Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0555 ATGGACTCGCAGCAGCTGTTCAGTTTCAGAGTGACTGGTGCAGGACTACCATACTCATCGTCTCATCCTTCTATTCCATCACTACATAACAGGCTGCTTGGATCCTTGAAATTTGACATAGGAAACTCTCCTAGTTCACCCATTTCAACTCATTTTGATTCTGATTCACTCTCTACATTGAGCGACAGCCAGGAGCAGCACAGCACTGGGGAGATCCTCTCTGGTTTCAGCCCTTGTTATAACTCATCACTGGAAACTAATTACTTAAACAGGTCAATCTCACCTGTGGACTGTCTCCAAGACCGTCTGAATCTGTATTCCACTAGGAGCTCTTCGGCACAGGATGCAAGTTCTAGCCAAAAGATCAGGCACGCATTGCTGGAGTTAGAGTCTGCTCTGATGGCCCCTGATGATGGCGATGAAGGTACCAAAACAAGAACCTCTTCGGGTGAGAATAGCAGTCCTACTACATCTGGCCAAAGATCTTGGCCTTGGAGCTATGAGCGCCAAGGGTCCCAATATGTTCAAAATCAGCCATCTTTTGTTACTAGCAGCAGGCAGTCAGGTGAAGTTATACATTTAGAGAAACGTCACAAACCAATGGAGGAAGCATGGCTACAAGGCTTCCCTCCGAGCAATTTAAAAGAATTGCTGATTGCTTGTGCAAAAGCCCTCTCTGAGAACAACATTAAAGTTTTTGATCAGTTGATTGAAAAGGCTAGAAGTGCTGTGTCTATCAGTGGGGAGCCAATCCAGCGGCTCGGTGCTTATATGGTAGAAGGGCTTGTTGCTAGGATGGAGGCATCAGGGAATAACATATATCACGCCCTTAGGTGCAGAGAGCCTGAAGGCAAAGACTTGCTCTCTTACATGCACATGCTGTATGAAATCTGCCCGTACTTGAAATTTGGTTACATGGCTGCCAATGGAGCCATAGCTGAAGCTTGCAGGAATGAAGATCGCATTCACATCATAGACTTTCAGATTGCTCAGGGAACTCAATGGGTGACACTCCTTCAAGCTCTTGCAGCAAGGCCTGGTGGGGCACCCTGCGTTCGCATCACGGGAATCGATGATCCTGTTTCTCGATATGCTCGTGGTGACGGACTAGATGCAGTTGGGACAAGATTGGCCATAATCTCACAGAAATTTGGCATCCCAGTTGAGTTTCATGGAGTACCTGTTTTTGCTCCAGAAGTAACAAGGGAAATGCTTGATGTGAGGCCAGGAGAGGCTTTGGCAGTGAACTTTCCCCTTCATCTCCATCACACGGCTGATGAGAGTGTTGATGTGAACAACCCAAGGGATGGGCTTCTGAGAATGGTGAAGTCACTTTCTCCCAAGGTGACCACATTGGTGGAACAGGAATCCAACACAAACACAACCCCTTTCTACAACAGGTTCCTAGAAACCTTGGATTACTACTTTGCCATGTTCGAGTCAATCGATGTCACGCTCCCAAGAAATAGCAAGGAGCGGATTAATGTAGAGCAACATTGCTTGGCCAGGGACATTGTGAACGTCATTGCTTGTGAAGGGAAAGAAAGGATAGAGCGACACGAACTGTTGGGAAAGTGGAAGTCAAGGTTGTCAATGGCTGGATTCCGACAATACCCGTTGAGCTCTTACGTTAATTCTGTGATTAGAAGCTTACTGAGGTGCTATTCAGAGCATTACACACTAGTGGAGAAGGATGGGGCTATGTTGTTGGGGTGGAAACACAGAAATTTGATATCAGCCTCAGCCTGGTATTGA 1755 0.4667 MDSQQLFSFRVTGAGLPYSSSHPSIPSLHNRLLGSLKFDIGNSPSSPISTHFDSDSLSTLSDSQEQHSTGEILSGFSPCYNSSLETNYLNRSISPVDCLQDRLNLYSTRSSSAQDASSSQKIRHALLELESALMAPDDGDEGTKTRTSSGENSSPTTSGQRSWPWSYERQGSQYVQNQPSFVTSSRQSGEVIHLEKRHKPMEEAWLQGFPPSNLKELLIACAKALSENNIKVFDQLIEKARSAVSISGEPIQRLGAYMVEGLVARMEASGNNIYHALRCREPEGKDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWVTLLQALAARPGGAPCVRITGIDDPVSRYARGDGLDAVGTRLAIISQKFGIPVEFHGVPVFAPEVTREMLDVRPGEALAVNFPLHLHHTADESVDVNNPRDGLLRMVKSLSPKVTTLVEQESNTNTTPFYNRFLETLDYYFAMFESIDVTLPRNSKERINVEQHCLARDIVNVIACEGKERIERHELLGKWKSRLSMAGFRQYPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKHRNLISASAWY 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0555 584 MobiDBLite consensus disorder prediction 131 164 - -
Dere08g0555 584 Pfam GRAS domain family 214 583 IPR005202 -
Dere08g0555 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 164 580 IPR005202 -
Dere08g0555 584 MobiDBLite consensus disorder prediction 146 164 - -
Dere08g0555 584 ProSiteProfiles GRAS family profile. 205 584 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0555 Dere-ChrDere08 8593026 8594780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0555 206 583 GRAS Transcription Factor Family AT5G48150 64.908 3.04e-179 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere08g0555 GRAS 1.6e-128 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0555 08 8593026 8594780 Dere07g0201 07 4096679 4098439 CCT
Dere08g0555 08 8593026 8594780 Dere08g0555 08 8593026 8594780 ECH