Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0525 ATGCTCAACTCTAGCCCCGTCGCTGTCTCTTCTTCGGCTTCGAATCTCGACGGAGGATCGTCCAGGTCCAACTTCATGATTCCGGCTCCATGCGAGCCTGGCAAGATCGAGATGTACTCACCTGCCTTCTATGCTGCTTGTACTTTTGGTGGAATTCTCAGCTGTGGACTCACCCGCATGGCGTTTACACCTCTTGACCTTGTCAAGTGTAATATGCTGATTGACCCTGCGAAGTATAAGAGCATCTCATCTGGATTCGAAGTGTTGCTTAAGGAGCAGGGAGTCAGGGGTTTCTTCAGAGGCTGGGTGCCTACCTTTCTTGGTTACAGTGCTCAGGGTGCCTGCAAATTTGGATTTTACGAGTTCTTTAAGAAGTATTATTCTGATATTACTGGTCCAGAGAACTTTGGGGCTGTACAAGGGAATAGTCCCTCAGTTGGGACACCAGCTTTGGTTGATCAAACTATCCTTGAAAGGTTCTTAAAAACTGAAATGGTGACAAACAGGCATCAACTCAACTGCAAGAAGAACAAGGTTGATGATTATCCCATAAGAAAGCAGAATTCATATTCACGTCAGAGTGTAGCGGTTGGTCTCTCTAATGCATCCAATAATGAGGCATTAAAGGATGAGGTGAAGTCATTGTCAAAGTCCCTTCAATCTGATGGTACTGTGGCAATGCATTATGGAGAAATTGACGATGCTGATTTCTTAGCTGTAGAAGATCATCTCCCCACATTACCTACTACTCATTATGCATATTTACTAGCAAAACAGTTCAGTTCACTGATGGATCATAAAGGATATATGAAGGAAGACAATCACATCCAACCAAAACCAAATCAGGTGAACCATCCTTCAGGCAATCAACCTAATGTAGTTGTTGTAACTCATAATAATCCGGTGGTTGAAATGCAGCAATATGGAGAACCAATTCCTGGTCAGTCGCCCAATGACATTGCAAAACCATCTACTAGTGGCAATGCGTCTCTAAACTCATCTCAGAACCTTTTAGCAAATGCAAGGATGTTGCCACCTGGAAACCCTCAGGCCTTACAGATGTCCCAAGGACTTCTTTCTGGTGTTTCAATGGCTCCAAGGCCACAGCAACTGGACCCACAACAATTAGTGCAATAG 1137 0.4424 MLNSSPVAVSSSASNLDGGSSRSNFMIPAPCEPGKIEMYSPAFYAACTFGGILSCGLTRMAFTPLDLVKCNMLIDPAKYKSISSGFEVLLKEQGVRGFFRGWVPTFLGYSAQGACKFGFYEFFKKYYSDITGPENFGAVQGNSPSVGTPALVDQTILERFLKTEMVTNRHQLNCKKNKVDDYPIRKQNSYSRQSVAVGLSNASNNEALKDEVKSLSKSLQSDGTVAMHYGEIDDADFLAVEDHLPTLPTTHYAYLLAKQFSSLMDHKGYMKEDNHIQPKPNQVNHPSGNQPNVVVVTHNNPVVEMQQYGEPIPGQSPNDIAKPSTSGNASLNSSQNLLANARMLPPGNPQALQMSQGLLSGVSMAPRPQQLDPQQLVQ 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0525 378 Pfam PHL domain 169 219 IPR046467 -
Dere08g0525 378 Pfam PHL domain 220 280 IPR046467 -
Dere08g0525 378 SUPERFAMILY Mitochondrial carrier 45 137 IPR023395 -
Dere08g0525 378 Pfam Mitochondrial carrier protein 45 128 IPR018108 -
Dere08g0525 378 MobiDBLite consensus disorder prediction 318 341 - -
Dere08g0525 378 Gene3D Mitochondrial carrier domain 32 169 IPR023395 -
Dere08g0525 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 42 126 IPR018108 -
Dere08g0525 378 MobiDBLite consensus disorder prediction 349 378 - -
Dere08g0525 378 MobiDBLite consensus disorder prediction 307 378 - -
Dere08g0525 378 FunFam Phosphate carrier protein, mitochondrial 28 133 - -
Dere08g0525 378 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 27 136 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0525 Dere-ChrDere08 8059050 8060482 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0525 21 134 Chloroplast and Mitochondria Gene Families AT5G14040 84.348 4.51e-65 209