Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0514 ATGGAGCTTCGAGACTGGCAAAAGATGACTAATCTTTTTTATATGCTTCTCTTTACAAAGGTTTTATTTTTGTTCTTTCATACTTCAGGTGCAGCTGACTACATAAACCAACTTCAGTCAATTCCTGAAGGTAAGAGCTTAGTTTCTGCAGATGGAAGTTTTGAATTGGGTCTTTTTAGTCCAGGAAGTTCTGCAGACCGTTACTTGGGAATATGGTACAAGAACATTCCAGTTCGGACTGTTGTCTGGGTTGCCAATCGAGGTAGCCCAATCAAAGACATGTCTGGCCTGTTGAAATTAGACAAACAGGGAAACCTATTACTTCTCAGCCAGAATGAGACTGTTGTTTGGTCAGCAAACCCCAGAAGAAATGTCCAGAACCCAATTGTTCAGCTTCTAGGTTCTGGAAATCTAGTACTAAGAGATGAGAAAGACAAGAATACCGAAAATTACTTGTGGCAGAGCTTTGACTATCCTTCTGATACATTGTTACCAGGAATGAAACTGGGGTGGGACCTAAAGACTGGTCTGAATTGGAGTCTATCTTCTTGGAAGAACTGGGATGACCCTTCACCAGGAGACTTCACTTGGGGTCTTGTATTTAGAGGTTACCCTGAGGTAGTGATGTGGAAGGGCTCATCAGAGTACTACAGAAGTGGCCCCTGGAATGGCCTTAGGTTCGATGGTGCCCCAGAATTGAAGACTAATCCTCTTTTTCAGTTCAAGTTTGTCTCCACTGAGGATCAGGTCTATTATACATACAACCTCAGGAATAAGTCAATGATATCAAGAATTGTCATGAACCAAACCATTTATTCTCGGCAGCGCTTCATATGGATCGAAGAAGCTCAAAGTTGGAGGCTTTATGCATCCGTTCCAAGAGACAACTGTGATTACTATAATCTTTGTGGCCCTTACGGAAATTGTGTCATGGGTGAGTCTCCATTCTGCCAGTGTTTAAGTGGGTTTAAGCCCAAATCGCCACAAAGGTGGGATATGATGGACTGGACTCAAGGATGTGTACGCGGTCAACAATTGAGCTGCCGGGACATCAATGAAGTTGGATTTGTGAAATTTAGTGGGCTGAAATATCCTGATTCTACGAATTCTTGGGTCAATGAGAGTATCAATCTTCAGAAATGCAGGGACAAGTGCTTAGGAAACTGTTCCTGTACGGCTTATGCAAACTCAGATATCAGGGGAGGAGACAGCGGATGTATGTTGTGGTTTGGTGATCTTATGGATATCAGACAGATTTCTGGTGATGGTCGGGATCTATATATTCGGATGAAAAGTCCTGAGATAGCTGTGAAAGATGAACATAAGATGAAGCTGGGAGCGATAATCATCATCGTTGCCTCAGTTGTTGTGATGATTTTGATTTTTTCCTACATTGGCAAGACAATGAAAATGTTCAGAGGTAGTTTTCTTACTCTGACTCAGGAAACAGAGAACAGCTTGATGGTACAGTATAATAATGAAGGCGAGCAAGAAGATTTGGAGCTTCCTTTCCTTGACCTTGCCACAATTGTCAAAGCCACTGATGACTTCTCAATTAGCAAGAAGCTTGGACAAGGTGGATTTGGGGCTGTATACAGGGGTACACTAATGGATGGAAAAGAAATTGCAGTGAAGAGGCTTTCACAGAGTTCTGGGCAAGGCTTGAATGAATTCAAGAATGAAGTCATATTGATTTCCAAGCTTCAGCATCGAAATCTTGTTAAACTTCTTGGTTGTTGTATTGAAGGAGAGGAGAAAATGCTTGTCTATGAGTACATGCCCAACAGAAGCCTAGACTCCTTTATCTTTGATCATGTAAAAGGTAAAGTTTTAGATTGGTCTAGACGCTTCAACATTGTTTGCGGAATTGCTCGGGGGCTTTTGTATCTTCATCAAGATTCTAGGTTGAGGATCATACACAGAGATCTTAAAGCAAGTAATATTTTACTTGACAATGAGTTGAATCCAAAAATTTCAGATTTTGGCATGGCTAAAACCTTTGGAGGAGATCAAACTGAAGGAAATACAAATAGAGTGGTTGGGACATATGGTTATATGGCACCTGAATATGCTATTCATGGACTATTCTCAATCAAATCCGATGTGTTTAGTTTCGGTGTATTACTATTGGAAATAGTAAGTGGAAAGAAAAACAGAGGATATTCCCATTCAAGTAAAAGTCTTAACCTTATTGGACATGCATGGAAATTTTGGAAAGAAGGCAGACCTTTGGAGTTGATTGATTCATGCTTGGAGGATTTATTCGATCTATCAGAAGCATTGCGTTGCGTCCATATCGGTCTTCTATGTGTGCAACAGCATCCTGATGATAGGCCAAATATGTCAAACGTGGTTGTTATGTTGAGCAGTGAAAGTGCCTTGGCTGAGCCTATGGAGCCTGCTTACATTATAGAGAAGACATTACCTGAAGCAGATCCTTCTAGCAAGCATCAGATTTCTTCAACTAATGAAATAAGTCTTACCATGTTAGAGCCTCGGTAG 2502 0.4101 MELRDWQKMTNLFYMLLFTKVLFLFFHTSGAADYINQLQSIPEGKSLVSADGSFELGLFSPGSSADRYLGIWYKNIPVRTVVWVANRGSPIKDMSGLLKLDKQGNLLLLSQNETVVWSANPRRNVQNPIVQLLGSGNLVLRDEKDKNTENYLWQSFDYPSDTLLPGMKLGWDLKTGLNWSLSSWKNWDDPSPGDFTWGLVFRGYPEVVMWKGSSEYYRSGPWNGLRFDGAPELKTNPLFQFKFVSTEDQVYYTYNLRNKSMISRIVMNQTIYSRQRFIWIEEAQSWRLYASVPRDNCDYYNLCGPYGNCVMGESPFCQCLSGFKPKSPQRWDMMDWTQGCVRGQQLSCRDINEVGFVKFSGLKYPDSTNSWVNESINLQKCRDKCLGNCSCTAYANSDIRGGDSGCMLWFGDLMDIRQISGDGRDLYIRMKSPEIAVKDEHKMKLGAIIIIVASVVVMILIFSYIGKTMKMFRGSFLTLTQETENSLMVQYNNEGEQEDLELPFLDLATIVKATDDFSISKKLGQGGFGAVYRGTLMDGKEIAVKRLSQSSGQGLNEFKNEVILISKLQHRNLVKLLGCCIEGEEKMLVYEYMPNRSLDSFIFDHVKGKVLDWSRRFNIVCGIARGLLYLHQDSRLRIIHRDLKASNILLDNELNPKISDFGMAKTFGGDQTEGNTNRVVGTYGYMAPEYAIHGLFSIKSDVFSFGVLLLEIVSGKKNRGYSHSSKSLNLIGHAWKFWKEGRPLELIDSCLEDLFDLSEALRCVHIGLLCVQQHPDDRPNMSNVVVMLSSESALAEPMEPAYIIEKTLPEADPSSKHQISSTNEISLTMLEPR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0514 833 PIRSF SRK 6 833 IPR024171 GO:0004674
Dere08g0514 833 SMART ntp_6 351 430 IPR003609 -
Dere08g0514 833 Gene3D Transferase(Phosphotransferase) domain 1 593 799 - -
Dere08g0514 833 MobiDBLite consensus disorder prediction 813 833 - -
Dere08g0514 833 MobiDBLite consensus disorder prediction 812 833 - -
Dere08g0514 833 Pfam Protein tyrosine and serine/threonine kinase 518 787 IPR001245 GO:0004672|GO:0006468
Dere08g0514 833 SMART serkin_6 517 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0514 833 Gene3D - 27 156 IPR036426 -
Dere08g0514 833 ProSiteProfiles Protein kinase domain profile. 517 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0514 833 Pfam PAN-like domain 355 416 IPR003609 -
Dere08g0514 833 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Dere08g0514 833 ProSiteProfiles PAN/Apple domain profile. 348 432 IPR003609 -
Dere08g0514 833 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 779 - -
Dere08g0514 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 481 592 - -
Dere08g0514 833 Gene3D Phosphorylase Kinase; domain 1 478 592 - -
Dere08g0514 833 SMART blect_4 38 159 IPR001480 -
Dere08g0514 833 CDD PAN_AP_plant 344 429 - -
Dere08g0514 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 190 IPR036426 -
Dere08g0514 833 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Dere08g0514 833 ProSiteProfiles EGF-like domain profile. 293 329 IPR000742 -
Dere08g0514 833 Pfam D-mannose binding lectin 80 185 IPR001480 -
Dere08g0514 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 593 796 - -
Dere08g0514 833 CDD STKc_IRAK 523 788 - -
Dere08g0514 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Dere08g0514 833 SUPERFAMILY Protein kinase-like (PK-like) 501 815 IPR011009 -
Dere08g0514 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 156 - -
Dere08g0514 833 ProSiteProfiles Bulb-type lectin domain profile. 32 153 IPR001480 -
Dere08g0514 833 CDD B_lectin 39 159 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0514 Dere-ChrDere08 7707619 7711286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0514 505 833 Receptor kinase-like Gene Family AT4G11530 56.677 4.02e-127 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere08g0514 PK_Tyr_Ser-Thr 4.5e-50 CL0016