Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere08g0511 | ATGGCCCAAACAGAGCTAGAAGCTAGTGGAGGGAAGATGCTGAAACATGCACCCAGCATACGGAAGAAAGCAGCTGTAGTCATAAGTTCAGTATTGTCTATTGGTGTTTTAATCCTATGCCTAGCCTTCTTCCAGTACAGATGGAAGAAGCACCAGGGAGCCAGAAAGATGAGAGGTATGTCAGAAAGAGATGCAAGTGAAATTTATGAGTACCAGAAGGAAGACCTAGAACTACCCTTCTTTGATATGGCTACACTTACTTCTGCAACCAACGACTTTTCAACTAGTAGTATACTGGGAGGTGGTGGTTTTGGATCTGTTTATAAGGGGAGGCTCGAAGATGGAAGAGAAATAGCCGTTAAGCGGCTCTCAAAGACTTCTAGGCAAGGACTACAAGAGTTCAAAAATGAAGTTATCCATATTGCCAAACTTCAGCACAGGAATTTAGTGAGGCTTCTAGGATGCTGCATTTATGCTGAGGAAAGGATGCTGGTCTACGAATTTATGCCTAACAAGAGCTTAGATTTCTTCATCTTTGATGAAGAAAGGCGCAAGCTACTAGACTGGCCCAAGCGTATTCGCATCATCAATGGGATTGCTCGAGGCCTTCTCTATCTTCATCAAGACTCAAGGCATAGAATAGTTCATAGAGATCTCAAGGCTGGAAATGTTTTGTTAGATGCTGAACTGAATCCAAAAATTTCAGACTTTGGACTGGCCAGAAGCTTTGGAGGGGATGAAAATGAAGTAAATACAAAGAATGTGGTTGGAACATATGGCTATCTGTCGCCAGAGTATATAATTGATGGGCTATTCTCAACAAAATCTGATGTGTTTAGCTTTGGTGTGTTGGTATTGGAGACAGTGAGTGGGAAGAGAAATAGAGGATTCTCTCATGAAGATCACCACTTTAACCTTCTGGGGCATGCATGGAGACTATTCGGAGAAGGAAGATGCCTGGAAATAGTTGATGCAACGATCTTGGAAACATTCAATATGTCTGAAGTGCTAAGGTCAATTCATGTGGGTCTACTCTGTGTGCAAAGAAATCCAGAAGAAAGACCAAGCATGTTGTCTGTAGTTACGATGCTGAGTAGTGAATCCTCTTTACCTCAACCTAAGATGCCCGGGTTTTTTACTGAAAGAGATCTGGTTGGTGACAGTTCATCATCAAGCTGCTATAAATCAACTTCAACAAATTATCTCACAATTAGCCAAATGGATGCAAGGTAG | 1233 | 0.4193 | MAQTELEASGGKMLKHAPSIRKKAAVVISSVLSIGVLILCLAFFQYRWKKHQGARKMRGMSERDASEIYEYQKEDLELPFFDMATLTSATNDFSTSSILGGGGFGSVYKGRLEDGREIAVKRLSKTSRQGLQEFKNEVIHIAKLQHRNLVRLLGCCIYAEERMLVYEFMPNKSLDFFIFDEERRKLLDWPKRIRIINGIARGLLYLHQDSRHRIVHRDLKAGNVLLDAELNPKISDFGLARSFGGDENEVNTKNVVGTYGYLSPEYIIDGLFSTKSDVFSFGVLVLETVSGKRNRGFSHEDHHFNLLGHAWRLFGEGRCLEIVDATILETFNMSEVLRSIHVGLLCVQRNPEERPSMLSVVTMLSSESSLPQPKMPGFFTERDLVGDSSSSSCYKSTSTNYLTISQMDAR | 410 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere08g0511 | 410 | CDD | STKc_IRAK | 99 | 364 | - | - | |
| Dere08g0511 | 410 | ProSitePatterns | Protein kinases ATP-binding region signature. | 99 | 121 | IPR017441 | GO:0005524 | |
| Dere08g0511 | 410 | Gene3D | Phosphorylase Kinase; domain 1 | 67 | 168 | - | - | |
| Dere08g0511 | 410 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 169 | 372 | - | - | |
| Dere08g0511 | 410 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 214 | 226 | IPR008271 | GO:0004672|GO:0006468 | |
| Dere08g0511 | 410 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 15 | 408 | - | - | |
| Dere08g0511 | 410 | SMART | serkin_6 | 93 | 364 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Dere08g0511 | 410 | Pfam | Protein tyrosine and serine/threonine kinase | 96 | 361 | IPR001245 | GO:0004672|GO:0006468 | |
| Dere08g0511 | 410 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 57 | 168 | - | - | |
| Dere08g0511 | 410 | ProSiteProfiles | Protein kinase domain profile. | 93 | 370 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Dere08g0511 | 410 | Gene3D | Transferase(Phosphotransferase) domain 1 | 169 | 374 | - | - | |
| Dere08g0511 | 410 | Pfam | Domain of unknown function (DUF3403) | 365 | 410 | IPR021820 | GO:0004674 | |
| Dere08g0511 | 410 | SUPERFAMILY | Protein kinase-like (PK-like) | 76 | 375 | IPR011009 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere08g0511 | Dere-ChrDere08 | 7666675 | 7669053 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere08g0511 | 81 | 387 | Receptor kinase-like Gene Family | AT4G11530 | 57.097 | 2.11e-124 | 373 |
Transcription factors information