Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0510 ATGGCTGAGGCGACGGTGTTTGATAAAGATGGTGGCAAATTGAAGGTAGAAGAAAGCGTATTTCGGTTGAAATTATTTCGAGTCAGAAACAGCAACAAATTATTCATGAGACGGGCAGAGGACATTTTTATTCGAGTCCCCACTTCAGAGTTAGAATATTTTGTGAATAAAGGCCATGGGAACAGCAACAAGAGAAAGCTTCTAGGAGTAGCAATTGGTTCTGTTATGTTAAACATGGGCATGGTACTTATAATTTATGGACTGATGACATGCGTACGGAAAAGGAAACTCAAAAAGCCTGGGATGACAAAAATATATTGCATGAATCCGTACTACATTAAACTAGGAAAGGACGACATGGATCTGCAGACATTTGATTTTTCAGTCATATCTAAAGCAACTAACAATTTTTCAAGCACCAATAAATTGGGAGAAGGTGGCTTTGGACCAGTTTACAAGGGTACTCTTATAGATGGACAAGAATTAGCTGTGAAGAGGCTGTCAAAGAATTCTGGTCAAGGGTTGGAGGAGTTCAAAAATGAAGTTTTGTTGATTGCCAAACTTCAACACCGTAATCTCGTAAAGCTTCTTGGTTGTTGCATTGAAGAAGAAGAAAAATTGTTGATCTATGAATACATGCCCAACAAAAGCTTAGACTACTTTATTTTCGATGAAGCTAGAAGCAAGCTATTGGATTGGACTAAGCGTTTCCACATTGTTAATGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGACTCTAGATTGAGGGTTATTCATAGAGATTTAAAAACCAGCAATGTTTTACTGGATACAAATTTGAATCCAAAAATATCAGATTTTGGCTTGGCTCGGACATTTTGGGGAGATCAAATTGAGGCCAAAACAAATAGAGTAGCTGGAACATATGGTTACATGCCTCCAGAGTATGCTGTGCATGGGCATTTCTCAGCAAAATCAGATGTATTTAGCTTCGGAGTTATAGTAATAGAGATAATCAGTGGAGAGAAGATCAGGAAATTTTCGGATCCAGAACACTCCCTAAATCTTCTTGGATATGCATGGGAACTATGGAGTGAAGGAATGGCATTGGAACTAATGGCTCCAGCATCAGGAGAAAGATGCAATCCATCTGAAGTCATACAATGCATACAGGTGGGCTTGTTATGCGTGCAACAAAGACCAGAAGATAGACCGGACATGTCATCTGTGGTTCTAATGCTAAACGGTGAGAAATCATTGCCCAACCCAAAGGTTCCTGCTTTCCACGTTGAAAGGAAAGTACATGAAGCAGATTCTTCCTCGGCAAAATGTAAGCTTTCCACACCAAATGAAATGTCCCTTACAATGTTCGAGGCAAGATAG 1365 0.3949 MAEATVFDKDGGKLKVEESVFRLKLFRVRNSNKLFMRRAEDIFIRVPTSELEYFVNKGHGNSNKRKLLGVAIGSVMLNMGMVLIIYGLMTCVRKRKLKKPGMTKIYCMNPYYIKLGKDDMDLQTFDFSVISKATNNFSSTNKLGEGGFGPVYKGTLIDGQELAVKRLSKNSGQGLEEFKNEVLLIAKLQHRNLVKLLGCCIEEEEKLLIYEYMPNKSLDYFIFDEARSKLLDWTKRFHIVNGIARGLLYLHQDSRLRVIHRDLKTSNVLLDTNLNPKISDFGLARTFWGDQIEAKTNRVAGTYGYMPPEYAVHGHFSAKSDVFSFGVIVIEIISGEKIRKFSDPEHSLNLLGYAWELWSEGMALELMAPASGERCNPSEVIQCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKSLPNPKVPAFHVERKVHEADSSSAKCKLSTPNEMSLTMFEAR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0510 454 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 105 212 - -
Dere08g0510 454 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 213 416 - -
Dere08g0510 454 Gene3D Transferase(Phosphotransferase) domain 1 213 421 - -
Dere08g0510 454 Pfam Protein tyrosine and serine/threonine kinase 140 406 IPR001245 GO:0004672|GO:0006468
Dere08g0510 454 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 47 447 - -
Dere08g0510 454 Gene3D Phosphorylase Kinase; domain 1 113 212 - -
Dere08g0510 454 SMART serkin_6 137 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0510 454 SUPERFAMILY Protein kinase-like (PK-like) 120 426 IPR011009 -
Dere08g0510 454 CDD STKc_IRAK 143 410 - -
Dere08g0510 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Dere08g0510 454 Pfam Domain of unknown function (DUF3403) 413 454 IPR021820 GO:0004674
Dere08g0510 454 ProSiteProfiles Protein kinase domain profile. 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0510 Dere-ChrDere08 7658175 7662471 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0510 118 425 Receptor kinase-like Gene Family AT4G23230 56.913 1.93e-129 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere08g0510 PK_Tyr_Ser-Thr 3e-47 CL0016