Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0508 ATGCCAGAAATGAAGCTTGGGTGGAATCTAGAGACGGGCCTGGATAGGCTTTTATCCTCTTGGAAAAGCACAGATGATCCTGGTCAGGGAGACTATAAAATTAAAATAGACCTTCGAGGCTATCCACAAGCAGTTCAACTGAAAGGAACCGTCATATACACTAGAGCAGGTTCATGGAATGGCCTTACTTTTACTGGGTACCCAGCTGGGAAGCCAAATCCCATATATAAATTGGAATTCGTGCTCAATGAGAAAGAGGTGTATTATGAGTACGAACTTCAAAATAGATCAGTTTTCACTAGATATATAATGTCCCCTTCTGGCATTGGGCAGCGATTAGTCTGGAAAACTCAAACAAGCAGCTGGGAGTTGGTGATTAGCCCTACTCTTCGTTTGTCAGATCATGCTGCAGGCTATGGCCATGGCTTTGGCAACTTCAAAAAGAAGAAGTTATATGTAGGAATTGGCGTTGGCTCATCAATATTACTCATGGGCTTGATAACTCTTGGGTTTTCAACAAATATATGGAAAACGAAACTTCAAAAGCCAGTGATGGTAGGAATATTTTACTGGAAGCATCACAAGAAAAAACTGTGGAAGGAAGACCTAAATCTGCCAACATTTAATATGTCAACCATTGCTGAAGCCACTAATAACTTTTCAAGCAGCAATAAACTTGGAAAAGGTGGATTTGGACCAGTGTACAAGGGTATACTGACGGATGGGCAAGAGTTAGCTGTAAAAAGGCTCTCCAAGAACTCTGGTCAAGGATTGGTGGAGTTCAAAAATGAAGTTACACTGATTGCCAAACTACAGCACCGTAATCTTGTGAAGCTTCTTGATGAAACTAGAACCAAGCTCTTGGATTGGCACAAGCGTTTCCACATTATCCGCGGCATTGCTCGGGGGCTTCTCTATCTTCATCAGGACTCTAGACTAAGAATTATTCACAGAGATCTCAAAACCAGCAACGTTCTACTAGATAACCATTTGAACCCAAAAATTTCAGACTTTGGCTTGGCTCGAACTTTTGGGGGAGATCAAGTTGAAGCCAACACAAATAGGGTGGTTGGGACTTATGGTTATATGCCTCCTGAATATGTTATGCGTGGGAATTTCTCAGTGAAATCTGATGTCTTTAGTTTTGGTGTCATCGTACTTGAGATAATTAGTGGGAAGAAGAACCGGGAATTTTCTGACCTAGAGCACAACCTTAATCTTCTTGGACATGCATGGAGACTCTGGACTGAAGAGAGGCCACTGGATCTTATAGATGAATTCTTAAGTGAAAGATGCACTGCTTCTGAAGTCATACGATGCATACATGTGGGAGTGCTATGTGTTCAACAAAAACCCGAAGACAGGCCTGACATGTCATCTGTGGTTCTTATGCTTAATGGTGAGAAATTATTGCCAAAGCCCAAGTCTCCTGGATTTTACACTGGAGGGGATTTACCTGGAGCAGATTCTTCATCAAGAAATTGCAATCAGTTTTCCCTAAATGAGATGTCCCATAGTATGTTAGAGGCAAGATAG 1536 0.4173 MPEMKLGWNLETGLDRLLSSWKSTDDPGQGDYKIKIDLRGYPQAVQLKGTVIYTRAGSWNGLTFTGYPAGKPNPIYKLEFVLNEKEVYYEYELQNRSVFTRYIMSPSGIGQRLVWKTQTSSWELVISPTLRLSDHAAGYGHGFGNFKKKKLYVGIGVGSSILLMGLITLGFSTNIWKTKLQKPVMVGIFYWKHHKKKLWKEDLNLPTFNMSTIAEATNNFSSSNKLGKGGFGPVYKGILTDGQELAVKRLSKNSGQGLVEFKNEVTLIAKLQHRNLVKLLDETRTKLLDWHKRFHIIRGIARGLLYLHQDSRLRIIHRDLKTSNVLLDNHLNPKISDFGLARTFGGDQVEANTNRVVGTYGYMPPEYVMRGNFSVKSDVFSFGVIVLEIISGKKNREFSDLEHNLNLLGHAWRLWTEERPLDLIDEFLSERCTASEVIRCIHVGVLCVQQKPEDRPDMSSVVLMLNGEKLLPKPKSPGFYTGGDLPGADSSSRNCNQFSLNEMSHSMLEAR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0508 511 SUPERFAMILY Protein kinase-like (PK-like) 205 473 IPR011009 -
Dere08g0508 511 ProSiteProfiles Protein kinase domain profile. 220 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0508 511 Gene3D Transferase(Phosphotransferase) domain 1 282 474 - -
Dere08g0508 511 Gene3D Phosphorylase Kinase; domain 1 188 281 - -
Dere08g0508 511 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 166 490 - -
Dere08g0508 511 Pfam S-locus glycoprotein domain 55 127 IPR000858 GO:0048544
Dere08g0508 511 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 271 473 - -
Dere08g0508 511 SMART serkin_6 220 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0508 511 Pfam Protein kinase domain 293 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0508 511 Pfam Protein kinase domain 221 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0508 511 FunFam Os08g0179000 protein 192 288 - -
Dere08g0508 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 315 327 IPR008271 GO:0004672|GO:0006468
Dere08g0508 511 Pfam Domain of unknown function (DUF3403) 471 511 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0508 Dere-ChrDere08 7567106 7569786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0508 212 480 Receptor kinase-like Gene Family AT4G23140 55.960 8.81e-115 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere08g0508 Pkinase 5e-27 CL0016