Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0502 ATGAGTTTATTCGTAGCATTGCTTACAGTAGCTCTATTTGCTTACTACTACCGGAGGAGAAAGCAAAGGGGACAAGGGGAGGATCTGCTATTGTTTGATGTAGGCATGAGCATGAAAGCTGATAGTTCAGAGCACACAAATCGAGAAAAGCTTGTAAAAGTTAACAAGAGGGAAGTCAAATTGCCGTTGTTTAGTTTTGCGAGTGTTTCAGCAGCAAGTGATAACTTTTCAGCTGCAAATAAGCTTGGCGAGGGTGGCTTTGGACCTGTTTATAAGGGTACGCTATTGAATGGGGATGAGGTTGCTATAAAAAGGCTATCTTCAAGATCTGGTCAAGGATGGGAGGAGCTGAAAAATGAAGCATTGCTCATTGCAAAACTCCAACACAACAATCTTGTCAGGCTTCTGGGCTGCTGCATTGAAAGAGATGAAAAGATGCTGATTTATGAGTTTATGCCAAATAAAAGCTTGGATTTTTTCCTTTTTGATGCAACAAAGAGCAAGATCTTAGATTGGGGAACCCGGATCCGGATAATTGATGGGATTGCACAAGGTTTACTCTACCTTCATCAGTATTCGAGGTTTCGAATCATTCACAGAGATTTGAAAGCTAGCAACATTTTGTTGGATATTAACATGAATCCCAAAATTTCTGATTTTGGAATGGCAAGAATGTTTGGTGGCAATGAACTACAAGCAAACACAAACCGGATTGTTGGTACTTATGGTTACATGTCTCCTGAATATGCTTTAGAAGGATTATTTTCAATAAAATCTGATGTATTTAGTTTTGGAGTCCTTCTATTGGAGATAATAAGTGGCAGAAAGAACAGAGGTTCTTATACAAATTCCCTGAATCTTCTTGCATATGCATGGGACTTAGGGACTAGCGGTAGAGGAATAGAACTGATGGATTCAATGGTAGAAGATGCATCCATAAAGGAAACAGAGGTGCGGAGATACGTGAACATAGCATTGCTTTGTGTTCAAGAAAGAGCAGAAGACAGACCCACCATGTCTGATGTTGTTTCAATGCTTGGGAATGAGAGTGCAGTTCTGCCTTCTCTTAAGCCTATTGCTTTCCTAAATGTAAGGGGTACGAATATTTCCAGATCGGATGGAGGCTCAACAGACAATGTTTCTATGAATGCTGTGACAGCTTCTGTTATGGATGCAAGATGA 1182 0.4019 MSLFVALLTVALFAYYYRRRKQRGQGEDLLLFDVGMSMKADSSEHTNREKLVKVNKREVKLPLFSFASVSAASDNFSAANKLGEGGFGPVYKGTLLNGDEVAIKRLSSRSGQGWEELKNEALLIAKLQHNNLVRLLGCCIERDEKMLIYEFMPNKSLDFFLFDATKSKILDWGTRIRIIDGIAQGLLYLHQYSRFRIIHRDLKASNILLDINMNPKISDFGMARMFGGNELQANTNRIVGTYGYMSPEYALEGLFSIKSDVFSFGVLLLEIISGRKNRGSYTNSLNLLAYAWDLGTSGRGIELMDSMVEDASIKETEVRRYVNIALLCVQERAEDRPTMSDVVSMLGNESAVLPSLKPIAFLNVRGTNISRSDGGSTDNVSMNAVTASVMDAR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0502 393 SUPERFAMILY Protein kinase-like (PK-like) 55 346 IPR011009 -
Dere08g0502 393 SMART serkin_6 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0502 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Dere08g0502 393 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0502 393 FunFam Uncharacterized protein 51 151 - -
Dere08g0502 393 Gene3D Transferase(Phosphotransferase) domain 1 152 353 - -
Dere08g0502 393 Pfam Protein tyrosine and serine/threonine kinase 79 346 IPR001245 GO:0004672|GO:0006468
Dere08g0502 393 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 152 354 - -
Dere08g0502 393 Gene3D Phosphorylase Kinase; domain 1 35 151 - -
Dere08g0502 393 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 356 - -
Dere08g0502 393 CDD STKc_IRAK 82 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0502 Dere-ChrDere08 7525532 7527348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0502 64 353 Receptor kinase-like Gene Family AT3G45860 59.864 1.27e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere08g0502 PK_Tyr_Ser-Thr 2.7e-47 CL0016