Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0491 ATGACGAAGCCTACTTCTAATGATGAAAAGAATGGATTGAAGAAAGGTCCGTGGACTCCAGAAGAAGACCAGAAGCTTATCGATTATATTCAGAAACATGGACACGGAAAATGGCGAACCCTTCCCAGGAATGCAGGGCTTAAAAGATGTGGGAAGAGTTGCCGACTACGCTGGACAAACTACTTGAGACCAGATATAAAGAGAGGTAGATTCTCATTCGAAGAAGAAGAAACCATCATCCAGTTACACAGTGTTTTGGGGAACAAGTGGTCTACAATTGCTGCTAGCTTGCCGGGAAGAACAGATAATGAGATCAAGAATTATTGGAATACCCACATCAAGAAGAGGCTGTTGAAGATGGGGATTGATCCAGTGACTCACGTACCATGCTTGGATATTCAACACCTCTCCTCCATTCTCAACTCTTCTCTCTACAACTCACCTCATCTTGATTATCCACCTCCTTTTGGAATGGGAAGTAATATATTAAATCCAAGCCTCTTAAGCTTGCTCTCAGCTCTCTTATCATCATCACAAAATTCAGATGTTCCAAGTCAAAATTTCCAGCACAACCAGTTTAACAACCCTATCCACACCTTCCCTATTCAAGAAAATCAATCTTGTGTTGCTTCTAATCCTTTACCTTCGGAATCTGATCAACTCATGAAAGCAAAACTGGATCTTATCTCTTCATGTACTACTAATTTTAGCTACCAAAATAGCCTAACAAACTTGGGACAGTATGATGGAGGAAATTACTCTACCAGTCTCCTGGAAAGACAGAATATTGTACAAAACAACAAGGGCATGCCGAATTTCAATTTACGGTCATTGTTACAGTACTCGACACCTTCATCTTCTACAAGCCCGAGCACTTTGAATTCATCAGCATCTTCCACAACATTTGTCAATGGTGCCACTGAAGATGAAAGGGACACTTACTGCAGCAACATGTTGATGTATAACATCTCAAATGGCTTAAATATTGATGACTCTGGACTTTTGTGA 1008 0.4058 MTKPTSNDEKNGLKKGPWTPEEDQKLIDYIQKHGHGKWRTLPRNAGLKRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNKWSTIAASLPGRTDNEIKNYWNTHIKKRLLKMGIDPVTHVPCLDIQHLSSILNSSLYNSPHLDYPPPFGMGSNILNPSLLSLLSALLSSSQNSDVPSQNFQHNQFNNPIHTFPIQENQSCVASNPLPSESDQLMKAKLDLISSCTTNFSYQNSLTNLGQYDGGNYSTSLLERQNIVQNNKGMPNFNLRSLLQYSTPSSSTSPSTLNSSASSTTFVNGATEDERDTYCSNMLMYNISNGLNIDDSGLL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0491 335 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Dere08g0491 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Dere08g0491 335 FunFam MYB-related transcription factor 14 67 - -
Dere08g0491 335 SMART sant 67 115 IPR001005 -
Dere08g0491 335 SMART sant 14 64 IPR001005 -
Dere08g0491 335 MobiDBLite consensus disorder prediction 1 22 - -
Dere08g0491 335 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Dere08g0491 335 Gene3D - 12 68 - -
Dere08g0491 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Dere08g0491 335 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Dere08g0491 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 276 - -
Dere08g0491 335 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Dere08g0491 335 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Dere08g0491 335 CDD SANT 70 113 IPR001005 -
Dere08g0491 335 MobiDBLite consensus disorder prediction 8 22 - -
Dere08g0491 335 FunFam Transcription factor MYB39 70 131 - -
Dere08g0491 335 Gene3D - 70 117 - -
Dere08g0491 335 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0491 Dere-ChrDere08 7437557 7438960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0491 9 330 MYB Transcription Factor Family AT4G21440 48.199 2.03e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere08g0491 Myb_DNA-binding 3.2e-16 CL0123