Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere08g0483 | ATGATGTTATCACCTACGCCATCGGCCATAGCGAGGAGCTCGCTGGAAGAAATGCTTGAATCAATCCGGCGGAGAGGAGAAGAAGAGAAGCCGAAAGACTTGCCTCCGGCATTGCCAGCTCGTCCGACCTCGAGAGCTCGGCTTCCCTCGGCAAGACGGTCGTTGCCGCATAAGTTTAGGATTGGAGGTGATCATGAAGCAACAGAAAGCTCACAGAATAATTTCAAAGCAAATGTAAAGGAAGAGACCGAGAAGAAAGATGGGGATACGGGACATAAAAGAAAAGGTAGTTTTGGGGGTAAGAAGATGATGCAGGACATTGAATCGCCGTATATCGTGACATCGGAAGAGAATATGAGTCAACCATCATCAGAGGACCCTGGTGCGTCATCTACTGCTTCCGCAGCTACAGGAGGAAAGATTCAGGAATTGAATTGTGATGGCAACGTTGCTTATTACATAAAAAAGGTAACCGAGCAGAAAGTGCTGGCTATAATGGTTGATTATATCAGTAAAAAGTCACCAAGAGGACAGTGGGGACTCGGACAGATACAGTCAACTTCAGGGGAGGAAGCTTTTGTTTTGCTCTCAGATGGAGATGTTACAAAAGTGGCAAGATCAGAGCTTTTACCAGCTAATCCAGATATTCTACAGGGTGTGGATGATCTTATTCAGCTTAGTTACTTGAATGAGCCCTCAGTTCTTCATAATCTCCAGTTTAGATATTCTCAGGACATGATTTATAGTAAAGCTGGACCTGTTTTGATTGCAATCAACCCCTTCAAAAATGTCCACATATATGGAAATGATTATGTCTCAGCTTATAGGCAGAAGACTATGGATTGCTCTCACGTTTATGCTATAGCAGATGTGGCTTATAGTGAGATGATGAGAGATGAAGTAAACCAGTCCATTATTATAAGTGGTGAGAGTGGATCTGGGAAGACAGAGACTGCAAAATTTGCTATGCAATACTTAGCTGCTCTAGGTGGTGGCAGTTGCGGAATAGAAAATGAAGTCCTTCAGACAAATTGTATACTAGAAGCTTTTGGGAATGCGAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCATGTTGGGGAAGATATGTGGGGCCAAAATTCAAACCTAGCAGTCGAGAGTTGTACAACTGGCAAGTGGTGAGAGGTCGTATCACATCTTTTATCAACTTTGTGCTGGTTCTTCACCTGATCTTAAAGAGAGACTGAATGTTAAAGCTGCCAGTGATTATAAATATCTCAATCAGAGTGACTGCATGACAATTGATGGTGTTAATGATGCTCACAAATTTCAAAAGCTGATGAAAGCACTGGATGATGTTCGAATTTCCAAAGAGGATCAAGAGCTAGTCTTTAAGATGATTGCTGCAATACTATGGCTGGGAAATATATCATTCCGAGTAACTGACTATGAAAATCACGTTGAGGTTGTAGATGATGATGCTGTAACCAGTGCTGCCCTGCTGATGGGTTGCAGTTCCGAGGAGTTAAGGGTAACTTTATCTACTCGAAAAATCCAAGCTGGCAAAGATACTATTGCCAAAAGGTTGACGTTGTGGCAGGCAACTGACACAAGAGATGGATTGGCAAAATTCATATACGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAATGCACTTGAAGTGGGTAAACGATGTACGGGGAGATCTATAAATATCCTCGATATCTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGCTTTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAAGATTATGAATTGGATGGCGTTGATTGGACAAGAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTTTTTGAGAAGAAACCTCTGGGGCTGATCTCTCTGTTGGATGAGGAATCAAATTTCCCCAGGGCCACTGATCTAACACTTGCCAACAAACTTAGACAGCACCTAAGTACTAATCCTTGCTTTAAAGGGGAAAGAGGCACAGCTTTCCGCGTTTGTCACTATGCAGGGGAGGTTTCATATGATACAAATGGATTTCTAGAAAAGAACAGAGATCCGCTTCCTTCTGATTCCATCCAACTCCTGTCATCATGTAGTTGTCAACTACTGCATTTGTTCTCCAAAATGCTTGATCAGTCTCAAAAGCAATCAAATTCCTCCAACATAGGTGCACTAGGTTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAGTTGATGCATCAATTGGAGAGCACCACACCTCACTTTATTCGCTGCATAAAGCCAAACACTAAGCACCTGGCCGGCATATACGATGAGGACCTTGTCTTACAACAACTCAGGTGTTGTGGAGTTTTGGAGGTTGTTAGAATTTCGAGGGCTGGATATCCTACTCGAATGATGCATCAAGAGTTTGCCAGAAGGTATGGGTTTCTGCTTTCTGAGGCCAACATATCTCAGGATCCATTAAGCATCTCAGTTTCCATTTTGCAACAATTTAATATCCCTCCTGAAATGTACCAAGTTGGCTACACAAAACTGTATCTTCGAACAGGGCAGATTGGTGCACTGGAGGATAGGAGGAGACAGGTTATGATGGGAATATATGGGGTTCAAAAATGGTTTCGTTGTCATCAAGCTCGCCGAAATTTTAATGGGCTTAAGAATGGTGCAATAACATTACAATCATTTGTTCGTGGAGAGATTGCGAGAAAGAAATATAGTGCTATGGTGAAGTCTTCTGCACTTATTGCTTCTGAAAAGCTTCAGCAGACCCGGGCAATCACACGACTACAATCTGTAGTTCGTGGGTGGCTGGTTCGAAGGCGTGCTGGTGGCATGCATAAGTTGAAGAAAGATACTAAAAATGCTAAACCTAAGCGAAAGTCACGTTCTAAGATGTCAGGAGTGAAGGATGTGTCCAAGGAGCAGCTTCAGAATCTGCCTTCAGCTATAGAAGAACTCCAAAACCGAGTCCTCAAAGCTGAAGCAACTCTGGAGCAAAAGGAAGAGGAAAATACTGCATTGAGAGAACAACTAAAACAATTCGAGACAAGGTGGATTGAGTATGAGATGAAGATGAAATCAATGGAACAGATGTGGCAAAAACAGATGGCATCTTTGCAATGGAGTCTTTCTGCTGCCAGAAGGAGCCTTGCTGCTGAAAATTCAACTGGTCAACCTGGAAGAAATGATGCTGCGTCTCCTTGCTACTATGACTCTGAGGACGCGACTTCTGTGGAATCTCGAACACCCAGTGGCAGCACACCTATCAAATTGCCTAGTACTCATTTTGAGATTGGAGTAAGGAGAGAGGCTAATGGTACTTTGAATGCAGTCAGCAATCTGACAAAGGAATTTGAGCAGCAGAGACAGACCTTTGATGATGATGCCAAAGCTCTGCTAGAGGTTAGATCAGGGCACTCAGCTAACATGAATCCTAATGAAGAACTTCGGAAGCTTAAACAGAGATTTGAGGGATGGAAGAAAGAATACAAGGGTAGATTACGGGGGACAAAAGTTAAGCTTAATAAGGCAGTGAGTCCGGAAGTGGAAATTAGTTGTCAAAAATGGTGGGGGAAGATAAGCTCAAGAGGTTTGTAG | 3672 | 0.4257 | MMLSPTPSAIARSSLEEMLESIRRRGEEEKPKDLPPALPARPTSRARLPSARRSLPHKFRIGGDHEATESSQNNFKANVKEETEKKDGDTGHKRKGSFGGKKMMQDIESPYIVTSEENMSQPSSEDPGASSTASAATGGKIQELNCDGNVAYYIKKVTEQKVLAIMVDYISKKSPRGQWGLGQIQSTSGEEAFVLLSDGDVTKVARSELLPANPDILQGVDDLIQLSYLNEPSVLHNLQFRYSQDMIYSKAGPVLIAINPFKNVHIYGNDYVSAYRQKTMDCSHVYAIADVAYSEMMRDEVNQSIIISGESGSGKTETAKFAMQYLAALGGGSCGIENEVLQTNCILEAFGNAKTSRNDNSSRFGKLIEIHFSMLGKICGAKIQTXQSRVVQLASGERSYHIFYQLCAGSSPDLKERLNVKAASDYKYLNQSDCMTIDGVNDAHKFQKLMKALDDVRISKEDQELVFKMIAAILWLGNISFRVTDYENHVEVVDDDAVTSAALLMGCSSEELRVTLSTRKIQAGKDTIAKRLTLWQATDTRDGLAKFIYASLFDWLVEQVNNALEVGKRCTGRSINILDIYGFESFQKNSFEQLCINYANERLQQHFNRHLFKLEQEDYELDGVDWTRVDFEDNQECLDLFEKKPLGLISLLDEESNFPRATDLTLANKLRQHLSTNPCFKGERGTAFRVCHYAGEVSYDTNGFLEKNRDPLPSDSIQLLSSCSCQLLHLFSKMLDQSQKQSNSSNIGALGSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKHLAGIYDEDLVLQQLRCCGVLEVVRISRAGYPTRMMHQEFARRYGFLLSEANISQDPLSISVSILQQFNIPPEMYQVGYTKLYLRTGQIGALEDRRRQVMMGIYGVQKWFRCHQARRNFNGLKNGAITLQSFVRGEIARKKYSAMVKSSALIASEKLQQTRAITRLQSVVRGWLVRRRAGGMHKLKKDTKNAKPKRKSRSKMSGVKDVSKEQLQNLPSAIEELQNRVLKAEATLEQKEEENTALREQLKQFETRWIEYEMKMKSMEQMWQKQMASLQWSLSAARRSLAAENSTGQPGRNDAASPCYYDSEDATSVESRTPSGSTPIKLPSTHFEIGVRREANGTLNAVSNLTKEFEQQRQTFDDDAKALLEVRSGHSANMNPNEELRKLKQRFEGWKKEYKGRLRGTKVKLNKAVSPEVEISCQKWWGKISSRGL | 1223 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere08g0483 | 1223 | Gene3D | - | 893 | 939 | - | - | |
| Dere08g0483 | 1223 | Gene3D | - | 586 | 775 | - | - | |
| Dere08g0483 | 1223 | CDD | MYSc_Myo8 | 232 | 873 | IPR036022 | - | |
| Dere08g0483 | 1223 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 455 | 563 | - | - | |
| Dere08g0483 | 1223 | Gene3D | Kinesin motor domain | 217 | 818 | IPR036961 | - | |
| Dere08g0483 | 1223 | MobiDBLite | consensus disorder prediction | 1098 | 1116 | - | - | |
| Dere08g0483 | 1223 | MobiDBLite | consensus disorder prediction | 971 | 988 | - | - | |
| Dere08g0483 | 1223 | ProSiteProfiles | IQ motif profile. | 947 | 976 | IPR000048 | GO:0005515 | |
| Dere08g0483 | 1223 | SMART | MYSc_2a | 212 | 886 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Dere08g0483 | 1223 | FunFam | Myosin IE heavy chain | 455 | 563 | - | - |
Showing 1 to 10 of 36 entries
Duplication type information
Functional genes information