Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0477 ATGGAGTCGAACCAGCGCAGTCATCCCGCAGATGATCGATTTCTTAAACCATTCATGGATGTGTTTTCTGGTCCAAATAAAGCTCTTGAGAGCTTAAATTACGAAGTGATTGAAAAGATCGGAGGTGGCGGTTTCGCTGATGTTCTCAAGTGCCGGAATCGTGAAACTAACAGGATTGTAGCTATCAAGGTTATCGCCATTCTGGATGATGAGAAAGAAGATGGCATTCCTAGCTCAATTATAAGGGAAGTCTCTGTTCTTAAAGAGTTAAACCATATCAACATTGTGAGGTTGCTGGATGTGCACTATGAAGAGACTGATATGTTTTTAGTTTTTGAGTATCTTGGTCTTGATCTAGGTAAATTCATAACACAAGAAAGTCCGATGCAACCTCAGCTGATAAAAAATCTACTGCATCAAATTCTTTCTGGTCTGGCATATTGCCATTCTCATAAAATTCTTCATAGAGATTTGAAGCCTCAGAATATACTTGTTGATCACTCAAACACACTAGTAAAGCTAGCAGACTTTGGTTTGGCGAAGCATGTTGGATTTCCTCTTTCTGCACATACTAATCATATGGCCAGTCTTTATTATACAGCCCCCGAACTCTTGGTGGGCTCCACTAGATACTCAACTCCAGTTGATGTCTGCCTGCTTGGTACCCCTACAGAAGAAACCTGGCCTGGTGTGACTTCTATGTTCAACTCTCTGAAACAGTTTGGTTCTATCAAGCCAAAGGACCTGCAACGCAATTTTCCTAAACTGGAACCTGATGGGGTTGATCTTCTTTCAGTTACCGGAGATTCTCCGGTGATCCATTCACGTATCAAAGATAGCGGGATGGAGTTGATCCGACACCGTGAAAAGTTGGACGGAGACACCGGAAGCGCCACTGTTGATGGCAGTGCCGGAGGTCAGACGGGTTCTCTTCCCGAGTTGCCTGATGAACCTGAAAAGAAAAATTCACTGGCTTGGGTACCAAATCAGAAATCTGATAATTTTTATGGTTATTCCATTACGTTCAAAGATCAAGCCAGTCATAAGCAGAATACTAACCCCCATAATAATGATCTTCCTAAAGAAATGTTGGGCTTACAGGACAAGTATTCATCTTCATGTGCATTATACCGGCAAGCACTGGCGCTTCCTGTCGAGAAAGATTACAAAATCGCTGTCTTTCGTCATATTTGA 1194 0.4229 MESNQRSHPADDRFLKPFMDVFSGPNKALESLNYEVIEKIGGGGFADVLKCRNRETNRIVAIKVIAILDDEKEDGIPSSIIREVSVLKELNHINIVRLLDVHYEETDMFLVFEYLGLDLGKFITQESPMQPQLIKNLLHQILSGLAYCHSHKILHRDLKPQNILVDHSNTLVKLADFGLAKHVGFPLSAHTNHMASLYYTAPELLVGSTRYSTPVDVCLLGTPTEETWPGVTSMFNSLKQFGSIKPKDLQRNFPKLEPDGVDLLSVTGDSPVIHSRIKDSGMELIRHREKLDGDTGSATVDGSAGGQTGSLPELPDEPEKKNSLAWVPNQKSDNFYGYSITFKDQASHKQNTNPHNNDLPKEMLGLQDKYSSSCALYRQALALPVEKDYKIAVFRHI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0477 397 FunFam Cyclin-dependent kinase 4 31 116 - -
Dere08g0477 397 MobiDBLite consensus disorder prediction 291 321 - -
Dere08g0477 397 Gene3D Transferase(Phosphotransferase) domain 1 122 267 - -
Dere08g0477 397 SMART serkin_6 34 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0477 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Dere08g0477 397 Pfam Protein kinase domain 34 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0477 397 SUPERFAMILY Protein kinase-like (PK-like) 33 265 IPR011009 -
Dere08g0477 397 Gene3D Phosphorylase Kinase; domain 1 26 116 - -
Dere08g0477 397 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Dere08g0477 397 PANTHER CELL DIVISION PROTEIN KINASE 33 229 - -
Dere08g0477 397 ProSiteProfiles Protein kinase domain profile. 34 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0477 Dere-ChrDere08 7246809 7252551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0477 33 265 Core Cell Cycle Gene Families AT3G48750 44.528 1.23e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Dere08g0477 Pkinase 4.6e-53 CL0016