Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0476 ATGATTCAAAAGATTGGAGATGGCAATTTCGCTCATGTTTTGAAGTGCCGGAATCGTGAGACTTGTGAGATTGTAGCTATAAAGATTATCCCCATTCTGGATAATGAGAAAGAAGATGGCATTCCAAGCTCAATTATAAGGGATGTCTCTCTTCTTAGAGAGTTAGACCATGTCAACATTGCGAGGTTGCTGGATGTGCACTATGAAGAGACTGATATGTATCTAGTTTTTGAGTATCTTGATCTTGACCTAAGTAAATTCATAGGACTTGAAAGTCCTATGCAACCTCCGCTGATAAAAAATGTACTGCATCAAATCCTTTCTGGTTTAGCATATTGCCATACTCATGAAATCCTTCATAGAGATTTGAAGCCTCAGAATGTGCTTGTTGGTCTCAGTAACGCATCAGTAAAGCTAGCAGACTTTGGTTTGGCGAAGGAAGTTGGAGTTCTTCTTTCGTCACATGGTGCCTCTGACTGGTATAAAGCACCTGAACTCCTGTTCGGCTCCACTGAATACTCAATCGCAGTTGATGTCTGGGCTGTGGGCTGTATCTTCGCTGAGATGCTTAACTGGAAATTATCAATGGGAAGCTTGCTTGGTACCCCGACAGAAGAAACCTGGCCTGGAGTGACGTCTATGTTCGACTGTCTGAAATATTATGATCCTCCTGTCACGCCAAAGAACTTGCAATGCAAGTTTCCTTTCCTGGAACCTGCTGGTGTTGATCTTCTGTCAATAATAGAATTTCAGCTGAAGATGCCCTCAAGCACTCATACTTCAGTGGTCATTGGGGCCTCAGGAAGAGGACTGAGAGGTGACATTTTGGTTGTCAGTAAGAACAAATCTGTAGCTTCAAACAGAGACTTAGAAACAATTGATGCAACAAACTCTTTCCCTGCTTTTTATAGATGTATCTTCAAGTGGGTTGCTTCTGTATTGTGA 945 0.4201 MIQKIGDGNFAHVLKCRNRETCEIVAIKIIPILDNEKEDGIPSSIIRDVSLLRELDHVNIARLLDVHYEETDMYLVFEYLDLDLSKFIGLESPMQPPLIKNVLHQILSGLAYCHTHEILHRDLKPQNVLVGLSNASVKLADFGLAKEVGVLLSSHGASDWYKAPELLFGSTEYSIAVDVWAVGCIFAEMLNWKLSMGSLLGTPTEETWPGVTSMFDCLKYYDPPVTPKNLQCKFPFLEPAGVDLLSIIEFQLKMPSSTHTSVVIGASGRGLRGDILVVSKNKSVASNRDLETIDATNSFPAFYRCIFKWVASVL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0476 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
Dere08g0476 314 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Dere08g0476 314 ProSitePatterns Protein kinases ATP-binding region signature. 5 28 IPR017441 GO:0005524
Dere08g0476 314 ProSiteProfiles Protein kinase domain profile. 1 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0476 314 Gene3D Transferase(Phosphotransferase) domain 1 90 249 - -
Dere08g0476 314 PANTHER CELL DIVISION PROTEIN KINASE 2 246 - -
Dere08g0476 314 SMART serkin_6 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0476 314 Pfam Protein kinase domain 2 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0476 314 SUPERFAMILY Protein kinase-like (PK-like) 2 246 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0476 Dere-ChrDere08 7241569 7244083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0476 2 246 Core Cell Cycle Gene Families AT3G48750 45.038 1.18e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Dere08g0476 Pkinase 5.3e-55 CL0016