Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0472 ATGGCGAGTCGGGTAACCATTAACCCGTTTTATGTGCTGGTGAAGACCCGGGAAACTAAAATGGTGAAGATGAAATTTTTGCAGTGGGTACCCTTTGTTTTGGTTGTATTTTTGTTTTTGATTGATGGGTCATCGTCATCTTTCATCCCTCCTGATAATTATATGATTGCTTGCGGTTCTACCCAAAACATAACCTTCCAAGGTCACTCTTATGTTCGTGATTCACAGCATTCTTCATTAGTTCTTAAAACTGGGAATTCAGTGGTTGCTAGTTCCAATTCTAGTGTCCCTTTTCCAATCTACCAATCAGCTCGGATTTTTACCTCTAAAGCTTCTTACAAATTCAAAATCGTGCAAGACGGTCGGCATTGGGTCCGGCTCTATTTCTTCCCTCTTCCCAACTCTGGCCATAACTTGACTTCTGCTTCTTTATCAGTGGTCACAGATGATTTTGTTCTCTTGAGCAACTTCACCTTTAGGAACTACAATGATTCTTATATGTTCAAGGAGTATGCAATCAATGTCACTTCTGATACCTTTACTCTCACCTTCATCCCTTCAAATGGTTCAATAGCTTTTGTCAATGCAATTGAAGTTGTGTCAATGCCGAATGATTTGTTTTTTGATCAGGCATTCGGTCTAAACCCGCGATCCCCATTCAGTGGCCTTTCTGAACTTGCTTTTGAAACTGTTTATCGGTTAAACGTTGGGGGTCCTTTGCTCACTGCCCAGAATGACACACTTGGAAGAACTTGGGTAAATGATCTCAAATACCTCCATGTGAATAGCTCTGTCCTTAATGTTTCAGTTAACCCGGCGAGCATTAAGTATCCACCAGGTGTTACTCGTGAGACAGCACCAAATTGGGTTTATGCCACTGCTGAAGTGATGGGCGATGCAAATGTTGCAAATACAAATTTCAACATTACCTGGGTTTTCCCCGTGGATCCAAGTTTCTCCTACTTTTTACGGGTGCATTTCTGTGATATTATGAGCAAGTCTCTCAACACTTTAGTGTTCAATCTGTACATAAATTCTGACTTAGCACTTGGAAGTTTGGACCTTTCATCATTAACTGGTGACTTGGCTGTGCCTTACTATAGGGACTTTGTTTCCAATGTCTCAGCAGATTCAAACACTTTGACCGTGAGTGTTGGTCCAGACAATATGGCAGACTTAACAAATGCCACTATGAATGGCTTGGAGATAATGAAAATCAGCAATAAATTAAAGAGCTTGGATGGGCTTGCCTCAGTTGAGAGTCTCCTTCCGAGTTCTCCTTCAAAGATGAAGAAGATAGGAATAATAGTTGGTTCTGTTGTTGGGGCTATAGCAGCATTAGCATTGGTTGGATTGGGTTATTGCTGTTTGGTGGGACGCAAGTCAAAGTCTAATCAACAAGGGCCTTCATGGCTGCCTTTACCCTTGTATGGAAACTCTCAGACCATGACAAAAATGTCAACGACTTCCCAGAAGAGTGGAACTGCAAGCTGCATTTCTTTAGCTTCATCAAATCTTGGTCGGTTCTTTAACTTCCAAGAAATCCTAGACGCGACCAACAAATTTGATGAAAAGTTGCTTCTTGGTGTTGGTGGTTTTGGGAGGGTTTATAAGGGAACATTTGAAGATGGGACAAATGTAGCTGTTAAAAGGGGCAATCCCAGATCTGAACAAGGTCTTGCTGAATTCAGAACTGAAATTGAAATGTTATCCAAGCTTCGCCACCGCCACCTTGTATCTCTCATTGGCTACTGTGATGAGAGGTCAGAAATGATTCTTGTCTATGAGTACATGGCTAATGGACCCCTTAGGAGCCATTTGTACGGAACAGATCTGCCACCTCTATCATGGAAACAGAGGCTTGAAATTTGCATTGGAGCTGCAAGGGGCCTTCATTATCTTCATACAGGAGCTGCTCAAAGCATAATCCACCGAGATGTGAAGACAACAAACATTCTCTTAGATGAGAACTTTGTTGCTAAAGTTGCTGACTTTGGCCTCTCAAAAACTGGTCCTGCTCTTGATCAGACCCATGTGAGCACTGCAGTTAAAGGAAGTTTTGGCTATCTTGATCCTGAATACTTCAGGAGGCAACAACTCACAGAAAAATCAGATGTGTATTCATTTGGGGTAGTTCTAATGGAGGTATTATGCACAAGACCAGCTCTGAACCCTGTGCTTCCCAGGGAGCAGGTTAATATAGCTGAATGGGCAATGACTTGGCAGAAAAAGGGAATGCTTGATCAAATCATGGATCAGAATCTGGTGGGGAAGGTAAATCCTGCTTCTCTGAAGAAGTTTGGGGAGACAGCTGAGAAGTGCTTGGCTGAGCATGGTGTGGATAGGCCATCCATGGGCGATGTGTTGTGGAATCTTGAATATGCTCTGCAGCTTCAAGAGACCTCATCAGCACTCATGGAACCTGAAGATAACAGCACAAATCACATAACTGGAATTCAGCTGACCCCGCTAGAGCCTTTTGATAACAGTGTGAGTATGATTGATGGGGGCATCTCTGGCACGGACGATGATGCAGAAGATGCAGCCACAAGTGCGGTGTTCTCACAAATAGTAAATCCTCGTGGAAGTTTTCAGGCTTGGGGTTGGAGCATAGTTTCTGACTCTGACCATTCCAAACTTGAAACGAAAAGCAGTGGAAATCTGTTGTTCTTACCTCTTTCAAGTGTATCTCTTGTCAATCATTCATCTCTGAATTCTCTGAATTTGTCTTTATGGGCGTCTTCGAGGCTTCCAAATGCTTGCAGAAAGAATGCTACTTTTGCAGCTTCCCTGTGTTCTTCGCCGTTTCCCTTTTATGAAGTTCTGATCAATTTGGGTAGGTCTTCCCTGCAGGAAAGATATGAAACCTACAGTATGCAATATGCATCGTCTCTTCGTGCTATGCATTACAGGCGCACCAAGTCTAAACACGGTCATTATTCTAATTATTGA 2952 0.4268 MASRVTINPFYVLVKTRETKMVKMKFLQWVPFVLVVFLFLIDGSSSSFIPPDNYMIACGSTQNITFQGHSYVRDSQHSSLVLKTGNSVVASSNSSVPFPIYQSARIFTSKASYKFKIVQDGRHWVRLYFFPLPNSGHNLTSASLSVVTDDFVLLSNFTFRNYNDSYMFKEYAINVTSDTFTLTFIPSNGSIAFVNAIEVVSMPNDLFFDQAFGLNPRSPFSGLSELAFETVYRLNVGGPLLTAQNDTLGRTWVNDLKYLHVNSSVLNVSVNPASIKYPPGVTRETAPNWVYATAEVMGDANVANTNFNITWVFPVDPSFSYFLRVHFCDIMSKSLNTLVFNLYINSDLALGSLDLSSLTGDLAVPYYRDFVSNVSADSNTLTVSVGPDNMADLTNATMNGLEIMKISNKLKSLDGLASVESLLPSSPSKMKKIGIIVGSVVGAIAALALVGLGYCCLVGRKSKSNQQGPSWLPLPLYGNSQTMTKMSTTSQKSGTASCISLASSNLGRFFNFQEILDATNKFDEKLLLGVGGFGRVYKGTFEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTPLEPFDNSVSMIDGGISGTDDDAEDAATSAVFSQIVNPRGSFQAWGWSIVSDSDHSKLETKSSGNLLFLPLSSVSLVNHSSLNSLNLSLWASSRLPNACRKNATFAASLCSSPFPFYEVLINLGRSSLQERYETYSMQYASSLRAMHYRRTKSKHGHYSNY 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0472 983 SUPERFAMILY Protein kinase-like (PK-like) 501 793 IPR011009 -
Dere08g0472 983 PANTHER OS07G0166700 PROTEIN 508 799 IPR045272 GO:0004714|GO:0006468
Dere08g0472 983 CDD STKc_IRAK 528 793 - -
Dere08g0472 983 Gene3D Phosphorylase Kinase; domain 1 480 597 - -
Dere08g0472 983 Gene3D Transferase(Phosphotransferase) domain 1 598 817 - -
Dere08g0472 983 FunFam Receptor-like protein kinase FERONIA 227 408 - -
Dere08g0472 983 Pfam Protein tyrosine and serine/threonine kinase 527 789 IPR001245 GO:0004672|GO:0006468
Dere08g0472 983 Gene3D - 53 203 - -
Dere08g0472 983 Gene3D - 226 408 - -
Dere08g0472 983 FunFam Putative receptor-like protein kinase 53 203 - -
Dere08g0472 983 SMART serkin_6 522 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0472 983 FunFam Receptor-like protein kinase FERONIA 598 814 - -
Dere08g0472 983 FunFam receptor-like protein kinase FERONIA 483 597 - -
Dere08g0472 983 ProSiteProfiles Protein kinase domain profile. 522 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0472 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Dere08g0472 983 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Dere08g0472 983 Pfam Malectin-like domain 56 406 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0472 Dere-ChrDere08 7217109 7220963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0472 45 813 Receptor kinase-like Gene Family AT2G21480 54.789 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere08g0472 Malectin_like 3.3e-38 CL0202