Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0467 ATGGGGAGGTGGGGCCCACTGAATTGGAATGGTGGTAAATTTAAATTTGTTACAGAGCTGGGTGGTGCTACATTGAGTGAAGCTTTGCAGTCGCTGTATATGGAGAGCACCGACTCATCCACCGGTTCGCAGCAACCGAACCTGCCGCCGGGGTTCCGGTTCCACCCCACCGACGAGGAGCTCGTCGTTCACTACCTCAAGAAGAAGGTATCCGCCGCTCCTCTCCCCGTTGCTATCATCGCGGAGGTCGACCTTTACAAATTCGACCCATGGGAACTCCCTGCTAAGGCAGCGTTTGGGGAGCAAGAGTGGTACTTTTTCAGCCCAAGGGACAGGAAGTACCCGAACGGAGCGAGGCCAAACAGGGCGGCCACGTCTGGGTATTGGAAGGCGACGGGGACTGATAAGCCCGTTTTCACTGCTAATGGTAGTCAGAAGGTTGGGGTGAAGAAAGCTTTGGTCTTCTACGGAGGGAAGCCCCCGAGAGGAATCAAAACCAATTGGATCATGCACGAGTATCGCCTCGCTGATAATAAGCCTAACAATAAGCCTCCTGGCTGTGACTTGGGCAACAAGAAAAACTCTCTACGGCTGGACGATTGGGTGTTATGCCGAATCTACAAGAAGACCAACACGCAGAGATCACCCATGGAGCATGAAAGGGACGATTCAATGGAAGATATGATTGGAGCTGGAGGGGTGGCTCCTTCGATCAACGTAGGCCAAATGAACGCCAGATTTCACCTTTCGAAGATGTCCACGATAAGCTACGGTGGAACCGCATTGCTGGAGAATCATCATGACCAGAACTTACTGGAAGGGGTTATAACGAGCAACAACAATAAGGAAGCAGATCTTCAGCTTCCTTTCGTGCCACCCATGACTGCGTCCACTGCCTCGAATTCAAACACGAAACGAACACTGTCGTCGCTGTATTGGAACAACAACGAAGAGGAGGATGTGAATGTCACAAAAAGATTGGGTTTCGATGAGAATAATGATAATAATAATGGGAGTGGTAGTAATTCTATAGCCACCCTGCTTAACCAGCTTCCTCAGACTCCTTCGTTGCATCACCAGACAATGCTTAGTGCATATCCATATTCAATACCTGGAATGAACTGGAAATACAAAGGTGCAGTGCCAGGATGTCCTTGTCCCCAAAAGAAACCATTTATAATTGAGACTACGTCTACGTGGGTGTCAATGGGTTGGTATGGTCCCATGGCAGGTCCAAGCATGCCCAACCATGAGCCAACTAAGCTTTTTATGACGGGATTTTGCTGTACTGCACATTCTAGTACCCATCAGAAGCAAAGCCAAGAAGGCTCGCCGATTCAAGCGAAGTTGTTGATCAGCGTGGACAGGATAGAGGAAAAGCTTAGCTTTGGTCATAAAAATGGGTACTTGGCCTTGTCTCCGAGGACACGCCCGGCCTGCACGTGCTCGAACCGCCCCGGTTCGGTCCGGTGTGCTCGTCATGGGTATCTAGTGCCGCCGGGGGAGAGGCAGAAGAAGCGTACGGCCAGCAAGGAGATCTTGAGGAGGGCACTGACGCCGCCGCCACGGCGGTTGGGCCTTAGGTTCTTGAATTTCCGGCCAACTCCGAGCAGACTCTCTCAGATGTCTATGGCTTAA 1638 0.5116 MGRWGPLNWNGGKFKFVTELGGATLSEALQSLYMESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKVSAAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVFTANGSQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKTNTQRSPMEHERDDSMEDMIGAGGVAPSINVGQMNARFHLSKMSTISYGGTALLENHHDQNLLEGVITSNNNKEADLQLPFVPPMTASTASNSNTKRTLSSLYWNNNEEEDVNVTKRLGFDENNDNNNGSGSNSIATLLNQLPQTPSLHHQTMLSAYPYSIPGMNWKYKGAVPGCPCPQKKPFIIETTSTWVSMGWYGPMAGPSMPNHEPTKLFMTGFCCTAHSSTHQKQSQEGSPIQAKLLISVDRIEEKLSFGHKNGYLALSPRTRPACTCSNRPGSVRCARHGYLVPPGERQKKRTASKEILRRALTPPPRRLGLRFLNFRPTPSRLSQMSMA 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0467 545 Gene3D NAC domain 57 214 IPR036093 GO:0003677|GO:0006355
Dere08g0467 545 ProSiteProfiles NAC domain profile. 48 209 IPR003441 GO:0003677|GO:0006355
Dere08g0467 545 Pfam No apical meristem (NAM) protein 49 175 IPR003441 GO:0003677|GO:0006355
Dere08g0467 545 SUPERFAMILY NAC domain 39 209 IPR036093 GO:0003677|GO:0006355
Dere08g0467 545 PANTHER NAC TRANSCRIPTION FACTOR 56 48 223 - -
Dere08g0467 545 FunFam NAC transcription factor 56 57 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0467 Dere-ChrDere08 7140215 7147444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0467 34 375 NAC Transcription Factor Family AT3G15510 51.491 2.75e-113 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere08g0467 NAM 1.2e-39 No_clan