Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0466 ATGGGAGTTCCAGAGACTGACCCGTTAGCCCAATTGAACCTACCTCCGGGTTTTCGGTTTTACCCGACGGACGAGGAGCTTCTGGTTCAGTACCTATGCCGGAAGGTGGCGGGCCACCATTTCTCTCTCCAAGTCATTGCTGAAATCGACTTGTACAAGTTCGACCCATGGGTCCTTCCAAGCAAAGCCACTTTTGGTGAGAAAGAATGGTACTTCTTTAGCCCAAGAGACAGGAAATACCCTAACGGATCCCGACCGAACCGGGTCGCCGGCTCTGGGTACTGGAAAGCTACCGGAACCGACAAAATCATCACCACCGAGGGTCGAAAGGTTGGGATAAAGAAAGCTCTGGTTTTCTACATCGGAAAAGCACCCAAAGGCACCAAAACCAATTGGATCATGCACGAGTATCGCCTCCTCGATTCTTCCCCGAAGAACGGAAGCGCCAAGCTTGACGACTGGGTTCTCTGTCGAATATACAAGAAGAACTCGAGTGCCCAGAAGACTGCGCCTATGGCTCCAATCAAAGAGTACGAATACAGCAATGGGTCGTCTTCTTCGTCGTCGTCCCACTTGGACGACGTGCTGGAGTCGTTGCCGGCAATCGACGACCGGTGTTTCGCGCTGCCTCGTGTGAACTCGAACTCGCTAAAGACGTGGCAGCAGGAGGAGAAGCTGAATTTCCAGAATCTGAACGGAGGGAACTTCGCGGACTGGGCTAACCCGGTGCTTCTGAACTCGGGGGCGGAGTTCGTTTCAGGAAATCAAACGCAGACCCAATCCCAATCCCAAGGGATGGTGAATTACAGTTCAATCAATGACATGCATGTGCCGTCGATGCCGCCGCTTTGCCACGTGGACGCGACGGTGCCGGAGGAGGAGGTTCAGAGCGGAGTGAGCAATTCCGGGTATTATCAGCAGAGTCCGAATGTGTTCACGCAGGGGTTCGGAAACTCTGTCACTGACCCGTATGGGTTCAGATACCCGACTCAGACAATGGGGTTCGGGTTCAGACAATGA 1020 0.5343 MGVPETDPLAQLNLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQVIAEIDLYKFDPWVLPSKATFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSSPKNGSAKLDDWVLCRIYKKNSSAQKTAPMAPIKEYEYSNGSSSSSSSHLDDVLESLPAIDDRCFALPRVNSNSLKTWQQEEKLNFQNLNGGNFADWANPVLLNSGAEFVSGNQTQTQSQSQGMVNYSSINDMHVPSMPPLCHVDATVPEEEVQSGVSNSGYYQQSPNVFTQGFGNSVTDPYGFRYPTQTMGFGFRQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0466 339 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Dere08g0466 339 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
Dere08g0466 339 FunFam NAC domain-containing protein 72-like 23 167 - -
Dere08g0466 339 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Dere08g0466 339 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 253 - -
Dere08g0466 339 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0466 Dere-ChrDere08 7122750 7123971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0466 1 275 NAC Transcription Factor Family AT3G15500 63.793 2.93e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere08g0466 NAM 6.6e-37 No_clan