Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0421 ATGGAGTCTCTCACACCCCTCTGCCTCTTCTTTCTTCTTCTCAGCCTTCTCTCTCACTCCCATGCCCGCAAATTGTTCGTCGGTGGAAGAGACGGCTGGGTCTTGAACCCCTCTGAGAACTATAATCAATGGGCCGGCAGAAACAGATTTCTAGTCAATGACGTTCTAGTGTTTAAGTACCAGAAGGGTTCGGACTCGGTGTTGGAGGTGAACAAGGAGGATTTCGACAAGTGTAATACGAAGAACCCGATCAAGAAATTTGAAGACGGTGATACAGAGTTTACGTTTGACAGATCGGGACCTTTCTACTTTGTTAGTGGAAAAGATGGGAATTGTGAGAAGGGTCAGAAATTGACGGTTGTGGTGTTGTCTATGAGATCACTGCCACCTTACAAGCCATCACCTACTCCTCACAAAGCTCCTTCTCCTGGTGGAACCGTCCCTGTTTCACCGTTCCCGACGACGCCCTCTGGCTCTCCGATGACTCCGTCTCCGTCGGGTAATTCTCCGTCAACATCGCCGTACCCGCCGTCCCTGGCACCAGTAGGATCTCCGATGACGCCGTCTCCGCCAACTTCTCAGGCACCGGCTAATGCACCAGGACACCCCTCTCCCGGTGGTAGTTCTCCTTCGACATCGCCTTACCCTCCATCTCAGGCGCCGGGAGGATCTACCACGATTCCATCCCCGGGAAGCAGTCCTCCGGCGACTTCACATGCGCCGGCCAATGCACCTGGATACCCATCTCCGGTGGGTAATTCTCCATCCATGACACCGTACCCACCATCTCTGGCGCCGGGAGGATCTCCGACTGTACCGTCTCCGATGAGCAGCCCTCCGGCGGGTTTGTCGGCGCCGACGATATCACCATCAGCCACATCTCCAGCTACTTCTCCCTCGATATCATCTTCGCCTCTGACATCGCCGCCGTTACCTTCAGCCACATCTCCAGCTGCTTCTACCTCACCAGCATCCCCTCCTCTGGCATCACCGCCGACACCAGGCACCCCTGGATCACCATTTTCGCCAGCGCCGAGCCCTGGAGGGTCTGCATCACGCTCGGCATCCAATGAAACGGCACCGTCTCCAAAATCGTCGGCGTGGGCTGTAGCTCCTTCGAACTTGTTGGTATATGTTGCTGCTATCATGGTCGGTGCCGCTCTTACTTAG 1170 0.5538 MESLTPLCLFFLLLSLLSHSHARKLFVGGRDGWVLNPSENYNQWAGRNRFLVNDVLVFKYQKGSDSVLEVNKEDFDKCNTKNPIKKFEDGDTEFTFDRSGPFYFVSGKDGNCEKGQKLTVVVLSMRSLPPYKPSPTPHKAPSPGGTVPVSPFPTTPSGSPMTPSPSGNSPSTSPYPPSLAPVGSPMTPSPPTSQAPANAPGHPSPGGSSPSTSPYPPSQAPGGSTTIPSPGSSPPATSHAPANAPGYPSPVGNSPSMTPYPPSLAPGGSPTVPSPMSSPPAGLSAPTISPSATSPATSPSISSSPLTSPPLPSATSPAASTSPASPPLASPPTPGTPGSPFSPAPSPGGSASRSASNETAPSPKSSAWAVAPSNLLVYVAAIMVGAALT 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0421 389 MobiDBLite consensus disorder prediction 224 239 - -
Dere08g0421 389 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Dere08g0421 389 MobiDBLite consensus disorder prediction 131 367 - -
Dere08g0421 389 MobiDBLite consensus disorder prediction 131 160 - -
Dere08g0421 389 MobiDBLite consensus disorder prediction 345 367 - -
Dere08g0421 389 PRINTS Proline rich extensin signature 205 230 - -
Dere08g0421 389 PRINTS Proline rich extensin signature 170 186 - -
Dere08g0421 389 PRINTS Proline rich extensin signature 126 138 - -
Dere08g0421 389 PRINTS Proline rich extensin signature 187 204 - -
Dere08g0421 389 PRINTS Proline rich extensin signature 149 170 - -
Dere08g0421 389 MobiDBLite consensus disorder prediction 252 280 - -
Dere08g0421 389 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Dere08g0421 389 CDD OsENODL1_like 23 123 IPR041846 -
Dere08g0421 389 PANTHER BLUE COPPER PROTEIN 26 205 IPR039391 GO:0009055
Dere08g0421 389 FunFam Early nodulin-like protein 1 22 127 - -
Dere08g0421 389 Gene3D - 21 127 IPR008972 -
Dere08g0421 389 MobiDBLite consensus disorder prediction 324 344 - -
Dere08g0421 389 MobiDBLite consensus disorder prediction 281 323 - -
Dere08g0421 389 MobiDBLite consensus disorder prediction 207 223 - -
Dere08g0421 389 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Dere08g0421 389 MobiDBLite consensus disorder prediction 167 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0421 Dere-ChrDere08 6668259 6669584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0421 4 259 Phytocyanin Superfamily AT4G27520 46.667 1.62e-57 189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0421 08 6668259 6669584 Dere08g0421 08 6668259 6669584 ECH