Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0412 ATGGTGGGCTCAGGAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACCATCCGTCCTCGCCCAAGAGTCAGAGGAGGTAATGGTTGCAAGGTTGGGGACGATAACGGCAGCTTGATGCTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGTTTCGGATTGTCTGGAAGAGATGGAAGGAGAGGATCCTGTGAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTGCATCTGATAAGTGCCACAAGTGGGTCTTAAAAGAGCCCACAGAATGTGAACCTAACATATCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACCGACCAGTTTGAGTCAGGCATTCAGACAATCGCAGTAATTCAAGCTGGCCATGGTCTTCTCCAACTTGGTTCTTGCAAGATTATTCTTGAAGACCTCCATTTCGTGCTGAGTATGAGGCGAACATTTGAATCTCTGGGGTACCAGTCTGGGTTCTACCTCTCACAACTCTTCTCTTCAACAAGAAACACTTCATCTTCTACTTCACTCCCTTCAAAACCATCCTCCACCATGCCAATTCGAGCACCTCCTCCTCTCTTCAACTGGGGTCAAAGGCCACTTGTTGCTTCTGCTGCAGCTTCTATGCTATCCTCACCCAATTTTCAACACACAGCTAGACTTGGAGGATTCCCACAGGCCAAAGATGAGAGTCATATGTTTCTGATGCCTCATCATTCATCGGCTGATCAACCTGCAAGAATCGAAGATATGATGGGGGAGAATGAGAATGACATAAAATGGCCAAATGGGTTGTCTTTCTTTAATGCTCTCACAGGACAGAACGATGATGCTACTAAGCTTTTGTTCCACCCAGAGAGCTTAGAGAACAACAAACCAGATGATGCCTCAAACCCCAATGAGTTCTTGAGCTTGGATAGCCACCACGGGACAGAAAGTGGGAGGAAAATGGACAAGTTTAAGAGGAGCTTCACTTTACCTGCTAGAGTGGCTTCATCTTCATCTTCAACCTCAATGGATCATCATCAGCATCAGCAACATCAACCACCACCTGTGGAGTATAGGAATTCTGAAGGAGGTATGTATCCCGATGTCATGGAGACCTTTTTGGAGTAA 1227 0.467 MVGSGASDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEMEGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVLKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIILEDLHFVLSMRRTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSSTMPIRAPPPLFNWGQRPLVASAAASMLSSPNFQHTARLGGFPQAKDESHMFLMPHHSSADQPARIEDMMGENENDIKWPNGLSFFNALTGQNDDATKLLFHPESLENNKPDDASNPNEFLSLDSHHGTESGRKMDKFKRSFTLPARVASSSSSTSMDHHQHQQHQPPPVEYRNSEGGMYPDVMETFLE 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0412 408 PANTHER GB|AAF34833.1 1 408 IPR044170 -
Dere08g0412 408 MobiDBLite consensus disorder prediction 364 389 - -
Dere08g0412 408 MobiDBLite consensus disorder prediction 324 408 - -
Dere08g0412 408 MobiDBLite consensus disorder prediction 329 344 - -
Dere08g0412 408 MobiDBLite consensus disorder prediction 345 360 - -
Dere08g0412 408 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 187 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0412 Dere-ChrDere08 6617169 6619384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0412 20 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.806 1.91e-19 89.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0412 08 6617169 6619384 Dere08g0412 08 6617169 6619384 ECH