Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0388 ATGGGCAGCGAACTAAGGAAGAAGCCCAAGCAAGCGCAGTTGAATCCTAACTGGCTTCAACTCCAACAAAAGCTAAAAATCCGAGGCTCTGATGCTTCAAGACCTTTCAAAAACTCTGACGCTGAAACCACAGACTCAGTATTGGGGAAGCGTAAAGAGAGGTCAGATGCAGAATCCAATGATTGTCAGATTAATCCTCTTACTCCTGTAAATGATGATTCCAGTCTCACGGATGCAGTAGCCATGGATTGTGAAATGGTTGGTGTTGGCCAAGGAAATAAAAGTGCTCTTGGAAGAGTAACTCTGGTTAATAGGTGGGGAAATGTTATTTATGATGAGTTTGTTCGACCAGTGGAGCGTGTTGTTGACTTCCGCACCAATATAAGTGGCATACGACCTCGGGACTTGAGAAAAGCAAAGGATTTTTGGGCTGTTCAGAAGAAAGTGGCAGAGTTGATTAAAGGAAGGGTCCTTGTGGGACATGCTCTGCACAATGATCTTAAGGCATTATTATTAAGTCATCCCAAGAAGCATACCCGGGATACCTCTGAGTACCAACCATTTCTAAACTGGTCAGGTTGCAGAAGAGCACTGCGACATCTTGCTGCTGAACTTCTTGGTGCTAAGATCCAATCAGGGGAGCACTGCCCTATAGAAGATGCTCGTGCTGCTATGCTGCTTTATCAAAAGAATAGAAAAGAATGGGAGAAGAGTGTAAAAGATCAATTTCGACTAAAACAGAAGCAGAAGAAACGGAAGCCGAAGAAGAAGCCAAAGAAGGAAGTTTCTTCAGATGGGAATGCCGCTGGAGGTGCATCATAG 822 0.4428 MGSELRKKPKQAQLNPNWLQLQQKLKIRGSDASRPFKNSDAETTDSVLGKRKERSDAESNDCQINPLTPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNRWGNVIYDEFVRPVERVVDFRTNISGIRPRDLRKAKDFWAVQKKVAELIKGRVLVGHALHNDLKALLLSHPKKHTRDTSEYQPFLNWSGCRRALRHLAAELLGAKIQSGEHCPIEDARAAMLLYQKNRKEWEKSVKDQFRLKQKQKKRKPKKKPKKEVSSDGNAAGGAS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0388 273 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 39 248 IPR047021 GO:0004527
Dere08g0388 273 SMART exoiiiendus 78 237 IPR013520 -
Dere08g0388 273 MobiDBLite consensus disorder prediction 236 273 - -
Dere08g0388 273 MobiDBLite consensus disorder prediction 244 258 - -
Dere08g0388 273 Coils Coil 218 238 - -
Dere08g0388 273 Gene3D - 75 255 IPR036397 GO:0003676
Dere08g0388 273 MobiDBLite consensus disorder prediction 29 70 - -
Dere08g0388 273 Pfam Exonuclease 80 228 IPR013520 -
Dere08g0388 273 MobiDBLite consensus disorder prediction 44 59 - -
Dere08g0388 273 SUPERFAMILY Ribonuclease H-like 79 229 IPR012337 -
Dere08g0388 273 CDD REX4_like 80 229 IPR037431 GO:0006364|GO:0008408
Dere08g0388 273 FunFam Interferon-stimulated exonuclease gene 20 75 247 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0388 79 237 C2H2 Transcription Factor Family AT3G27970 34.483 2.28e-27 107