Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0380 ATGGCACAGTTACCTCCTAAAACACCAACCATTTCACAAAATTGGCCATCTTTTCCTCACCAAAAGATGTCAACTACGGCTAATTTCAATCCCACTAGCACAGCTCAACAACAACAATATCATCATAATCATCATCAACTGCAGCAGCAACAGAACAATCCTCCACCACTATCACAACAACAATTACCTTCCTGGGTCGACGAGTTCCTCGACTTCTCATCCGCGCGGCGTGGTGCCCACCGGCGGTCGGCGAGCGACTCCATCGCGTTCCTCGAGGAATGCCGGAGCTCCGGTTCTGTCATCCCGGCGGGGGTCCATGGGTTCGACAGGTTGGACGAGGACCAGCTAATGTCGATGTTCTCCGACGACATTGCCTCCGGCGGTTTGCCACCAGAGTTGTCGAACCCGTCCACGCCGTCCGATCAAAATAGCAACAACGATGAGAAGGCAATGGCCCTAGATGAAGACGTCCCAGTTCAAGAGAAACAGCAGCCGCTAAAGAATAACGAGCAAGGAGAGGTGGAAAGCTCATGCAAAAATGACACAGCATCGCCGCCGCCCTCCGCCGCCCCCAACAGTGGCGAAACTGTCGTCGATCCTAAAAGGGTCAAAAGGATTTTGGCGAACAGGCAATCGGCTCAGAGGTCAAGGGTGAGAAAGCTACAATACATATCTGATCTGGAGAAGAGCGTAACAGCATTGCAGACGGAGGTATCAGCGTTGTCGCCGCGAGTAGCATTCTTGGACCACCAACGTTTGCTTCTCAACGTCGACAACAGTGCCTTGAAGCAACGCATTGCTGCTCTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGAAGCATTAAAGAAGGAAATAGAAAGGCTAAGGCATATCTATGAGCAACAGACGATGCAGAAGAGAGGAAACTCAGTGAACAACAACATCAATGGCCATTCATCGCCCTCGCCATGTATGGGGAAGCTCAGTGGATGA 978 0.5112 MAQLPPKTPTISQNWPSFPHQKMSTTANFNPTSTAQQQQYHHNHHQLQQQQNNPPPLSQQQLPSWVDEFLDFSSARRGAHRRSASDSIAFLEECRSSGSVIPAGVHGFDRLDEDQLMSMFSDDIASGGLPPELSNPSTPSDQNSNNDEKAMALDEDVPVQEKQQPLKNNEQGEVESSCKNDTASPPPSAAPNSGETVVDPKRVKRILANRQSAQRSRVRKLQYISDLEKSVTALQTEVSALSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRHIYEQQTMQKRGNSVNNNINGHSSPSPCMGKLSG 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0380 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 251 IPR004827 GO:0003700|GO:0006355
Dere08g0380 325 MobiDBLite consensus disorder prediction 1 64 - -
Dere08g0380 325 SMART brlzneu 197 261 IPR004827 GO:0003700|GO:0006355
Dere08g0380 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Dere08g0380 325 MobiDBLite consensus disorder prediction 162 191 - -
Dere08g0380 325 Pfam bZIP transcription factor 201 245 IPR004827 GO:0003700|GO:0006355
Dere08g0380 325 CDD bZIP_plant_RF2 202 252 IPR044759 GO:0003700|GO:0006355
Dere08g0380 325 Gene3D - 200 273 - -
Dere08g0380 325 MobiDBLite consensus disorder prediction 121 201 - -
Dere08g0380 325 Coils Coil 280 300 - -
Dere08g0380 325 SUPERFAMILY Leucine zipper domain 201 255 IPR046347 GO:0003700|GO:0006355
Dere08g0380 325 MobiDBLite consensus disorder prediction 300 325 - -
Dere08g0380 325 FunFam Basic leucine zipper 61 200 273 - -
Dere08g0380 325 PANTHER BASIC LEUCINE ZIPPER 34 1 312 - -
Dere08g0380 325 MobiDBLite consensus disorder prediction 131 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0380 Dere-ChrDere08 6302502 6304349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0380 1 279 bZIP Transcription Factor Family AT3G58120 52.443 8.85e-83 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere08g0380 bZIP_1 3e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0380 08 6302502 6304349 Dere08g0380 08 6302502 6304349 ECH