Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0367 ATGGCTGCTAGTGGCCTCGGGTTGAGGATACTTGGTTTTGTTTCAAATGTTTGTGACAAAATTAACCATAATGACAGCGAGTGTGGATCTATAGCATATGATAACGTAGAAAGCCGCTTTAAAAGTAAAGACTGGTGTCACTGTAGCTTGATGATTCTCACAGCACTTGAGGTTGCTGTGGTTGTAGAAAATTTGAGGTTCTTTCTCTCCCCTGATAAACAGCTAATGGCTGAACTCGTTTATGTACCAACATTTGAGGGATATAGCCATATAGCTGATGAAGCTTATAAGTCATCCCGAAATGAACTTGCTTTCAAACAGTGTGAGGTGTTCATAGAGAGGTTTGAAGAAGTGTGCCAAGAGGTGGATGATATTGTAGGACAGGATGCTGTTAAATATCTCGGGAATCAGGTACAGAATGTTGGAGATAGTGTGAAAAGGTTCTATTCTGATGTTGTTCAGGAGGTGCTTCCCCAGCCTCCCTTGGTCAATTTTGTGAAACAGGGATATCGTTCAGTGGCTTTGAACAATAATGTTGACTCTCCATTAGGGTCAATTGCAGCTGTTGCAGAAAATAAAAAAGGGACTGAGGAAAACCCTTTCAATAATCTCGTTGAGTCACATGATTCTGATGTGAATAATCTTGCTAAAAATCAGCATGCTCAAGCTTCCATTGGACTTGACTTTGAAAATCAAGTTAGGGATGAAATTTCTTCAAATTCCCATGAGGTGGAAGATTCTCACTCTACCCGAGAAGAGGTTGGTCATGATTACTCAATGGAAACTTCTGGTATCAAAAATAAAAATTTGCACGAGAGTGTTGAACAGGGTGCTGTCAAGTCAACTCCTCAACTGTTGATGTCTCTTAATGAGAAAGAACCCCTTGAATCCTCAAATGGTTCTTATGACAGTGGATATGGGGCTCTTGCTGGAACAGAGAACTCAGATGTGCATTGGGTACAAAACTCATGTACTATCGTTCAAGAAGATGCTTTAAAGTTGTCTACTTCTCAAGTGCCAAAGGGCATGCTTCTTAGCCAGAAAGAATCACTTGATGGCTCTTTATTCAGCGAGCACTTTGATGGTGATGATGAGAGCTCATGCATAGATGAAGTTTCACCTGCAACTTCCATTTCGAATATGAAGTCTCAGTCTTCCCCAAAAGCAGGGACAGTTAATTATAACATCGCAGCTAGGGATCAACATTGTTATGGTTCAGAATCTTCAGATACTCTCAGTTCCTCTGAAGTGTCATCCTCCACTGTGCCTAGTGAAAGGCCTACAATGAATGTTGAACCTTTAATTTTCAAAAGTTCCCTCATGTCTGACTCTGACAGTCTATCTGCAAAATCACCAGGGTGCTATTCCTTTGATATTGACTCTTGCAAGGACAATTCAGTTGATGTTGCTGGGTGTACTTTAGACAGTTCCATGGTGCTTGTATCATGTACAACGACCCCTGATATAGGTGTAGCTGGTCAGTTCATGACATCAAAGGCTGGACTTCTTTCCTATGGTAGCAGTCAGTCAATGGAATCAAATGATGAATCTCTGGTCAATTCTCTTGAATCCTGCAAGGACATTCAATTGAGTGATGATGTAAAGCTTGAGGAAAGTTGCGTATTTGTGGATGATAGTGAACTGCATGCTGTCTCCTACAGGGCCCGCAGGCTTAGATCGTACAAGAAAAGAATCAAGGATGCGTTTGCTCCAAAGAAGAGGTTAGAAAAGGAGTATGAACAGCTAGCAATATGGTATGGAGATAGTGACATGGAGTCCAGTGAAAGTACAGCACAACCTGTCATGCCATTGAGCTCTAGAAGATCCCTGGACTCCAAGAACCTGCAAGTGCAGCACTCATGTGAAACTGAGTGGGAGCTTCTTTTGATTTCAAAGAGTGGGACGAGGCATAAATTGTTGTTGCGTCTCAGCTCTCGTCGCTTTCACTGGGAGATGATTGGCGGTGGATTGTGCAGTCTCCGTTCGTGTTACTTGCATCTCCCTTGCTTATCGGAGAAACCTCTGCTCCGAGCAGCTCGGGTCTTATACGCTTGCCGCCGCCGCCGCCTTGTGTCCACCGCGTCCTCGGTTTCCGAAGCGAAGAAGAAGGAAACCAAAGAGAAGGTCATAGTGATTTCTGGTCCCACTGGGTCTGGTAAAAGCCGGCTTGCATTGGAGCTCGCGAAGCGCCTCAATGGTGAGATTGTCAGTGCGGACTCTGTCCAGGTATACCAGGGTCTTGATGTTGGATCAGCAAAGCCCTCCCTAAATGATAGAAAGGAGGTACCGCATCATCTGGTTGACATATTGCACCCATCTGAAGATTATTCTGTTGGACAATTTTTTGAGGATGCAAGGCAAGCTACAAGGTCCATTCTTGACAATGGTCGTGTTCCTATAGTTGTTGGGGGAACTGGATTGTACTTAAGATGGTTCATTTATGGAAAGCCTGACGTCCCCAAAGCCTCTCCAGAGACTACATCTGAAGTGTATTCAGAGTTAGTTGAATTACAGGGAAATAGAGACTGGGATACAGCTGTGCAGTTGGTTGTAAAAGCAGGTGACCCAAAGGCCCAGTTTATAACTCCCAATGATTGGTATCGATTACGACGTAGCCTTGAGATTATCAAGTCTAGTGGATCACCTCCATCTGCTTTTTGGGTACCATACAATTCTTTCCGGGAACAGGGAGATTCTTGTGTTGTGGACAATTCTGACTATTCTGAAGAAACATCCTCAGATTTGGACTATGAGTTCATTTGCTTTTTCCTTTCTAGCCAGAGACTTGAACTCTATAGATCAATTGATTGTCGCTGTGAAGATATGCTATTAGAAAGGAATTGTATATTGTCTGAGGCTCAGTGGCTTCTTAATATGGGTCTTTTTCCAAATTCAAATTCTGCAACCCGAGCAATTGGTTACAGGCAGGCCATGGACTACTTATTAAGATGCAGACAGCAAGGGGGTCAGAGTTCAGTTCGAGAATTCTTCAAGTTTTTATCTGAATTTCAAAAGGCATCTAGGAATTTTGCCAAAAGACAGTTGACATGGTTTCGAAATGAACATATATACCACTGGCTTGATGCTTCTAAACCTAGGGAAACTGTTCTAGACTTTATCTATAAATCTTACCATGATAAGAGTAGAACTATCACTGTTCCTGGACACCTAAGAATTTCTAGAGATACTTCTAACGGCCGAGAAGCTTCTGAACTCAAGTCCTACCGCCCCAAAAATAGGCATTTCTTGAATAGAGAAGATTGTTCTCATGTTCTGGACTGGATGAGGAGAACTCATGGCCGAATTACTGAACCGTTCGTTGGTTGCCCTTGA 3333 0.4287 MAASGLGLRILGFVSNVCDKINHNDSECGSIAYDNVESRFKSKDWCHCSLMILTALEVAVVVENLRFFLSPDKQLMAELVYVPTFEGYSHIADEAYKSSRNELAFKQCEVFIERFEEVCQEVDDIVGQDAVKYLGNQVQNVGDSVKRFYSDVVQEVLPQPPLVNFVKQGYRSVALNNNVDSPLGSIAAVAENKKGTEENPFNNLVESHDSDVNNLAKNQHAQASIGLDFENQVRDEISSNSHEVEDSHSTREEVGHDYSMETSGIKNKNLHESVEQGAVKSTPQLLMSLNEKEPLESSNGSYDSGYGALAGTENSDVHWVQNSCTIVQEDALKLSTSQVPKGMLLSQKESLDGSLFSEHFDGDDESSCIDEVSPATSISNMKSQSSPKAGTVNYNIAARDQHCYGSESSDTLSSSEVSSSTVPSERPTMNVEPLIFKSSLMSDSDSLSAKSPGCYSFDIDSCKDNSVDVAGCTLDSSMVLVSCTTTPDIGVAGQFMTSKAGLLSYGSSQSMESNDESLVNSLESCKDIQLSDDVKLEESCVFVDDSELHAVSYRARRLRSYKKRIKDAFAPKKRLEKEYEQLAIWYGDSDMESSESTAQPVMPLSSRRSLDSKNLQVQHSCETEWELLLISKSGTRHKLLLRLSSRRFHWEMIGGGLCSLRSCYLHLPCLSEKPLLRAARVLYACRRRRLVSTASSVSEAKKKETKEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYQGLDVGSAKPSLNDRKEVPHHLVDILHPSEDYSVGQFFEDARQATRSILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASPETTSEVYSELVELQGNRDWDTAVQLVVKAGDPKAQFITPNDWYRLRRSLEIIKSSGSPPSAFWVPYNSFREQGDSCVVDNSDYSEETSSDLDYEFICFFLSSQRLELYRSIDCRCEDMLLERNCILSEAQWLLNMGLFPNSNSATRAIGYRQAMDYLLRCRQQGGQSSVREFFKFLSEFQKASRNFAKRQLTWFRNEHIYHWLDASKPRETVLDFIYKSYHDKSRTITVPGHLRISRDTSNGREASELKSYRPKNRHFLNREDCSHVLDWMRRTHGRITEPFVGCP 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0367 1110 PANTHER BNAA05G11610D PROTEIN 113 628 - -
Dere08g0367 1110 Gene3D - 818 887 - -
Dere08g0367 1110 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 709 886 IPR018022 GO:0008033
Dere08g0367 1110 MobiDBLite consensus disorder prediction 405 428 - -
Dere08g0367 1110 FunFam tRNA dimethylallyltransferase 9 817 888 - -
Dere08g0367 1110 Gene3D - 706 1085 IPR027417 -
Dere08g0367 1110 Pfam IPP transferase 742 1021 - -
Dere08g0367 1110 MobiDBLite consensus disorder prediction 405 427 - -
Dere08g0367 1110 Hamap tRNA dimethylallyltransferase [miaA]. 709 1038 IPR018022 GO:0008033
Dere08g0367 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 709 836 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0367 Dere-ChrDere08 6151996 6172321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0367 712 1000 C2H2 Transcription Factor Family AT2G27760 27.946 8.45e-21 95.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0367 08 6151996 6172321 Dere08g0367 08 6151996 6172321 ECH