Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0365 ATGGGGTCACCATTCAAGCCAATTTCATGTCCCAAAAAAACCCAATATCGGATAGAAACCAAGAACTTGTCATACAGATTATGCAGCCAGCTTGATGAACTCAGAAGTCTTTGTTTTGGCTCAAACCCAAGGAAAGGTGCTAAGTTGATCTTGAAAGATCTGAATTGTGAGGCAAAACCTGGGGAGCTTACTGCTATTGCTGGTCCTAGTGGCGCTGGAAAAACCACACTGCTAGAGATTCTTGCTGGGAGAGTATCCCCATGTAAGATTTCAGGGCAAGTGCTTGTCAATCAAAGGCCTATGGACTCGAACAGGTTTAGAAGAACATCTGGGTATGTCACACAAGAAGATACTTTGTTCCCTTCGCTTACAGTTAGAGAAACACTCATGTATAGTGCACTTCTGAGGCTTCCGGGTGGGAGAAAAATGGCTGCTGCCAGAGTTGCAGAGTTGATGAAGGAGCTTGGGTTGGATCACATTGCAGATTCAAGAATTGGTGGTGGTGGTGGTGGAGGATCGTCAAACCACGGCATTTCAGGTGGAGAAAGGCGAAGAGTTTCCATTGGAGTTGATTTGGTTCATGACCCTGCAGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCTGCTTTGAATATAGTCTCCTTGCTCAGACTAATGGCATTTAATCAAGGTAAGACTATTGTTTTAACCATCCACCAACCCGGGTTTCGGATTTTAGAGCTATTTGATCACCTTGTTTTGCTTTCGGATGGATTTGTCATGCATAATGGGTCATTGAATCTTCTTGAGGCTAGGCTCAAGTTGGCCGGGCACCACATTCCCCTCCATGTAAATGTCCTTGAATTCGCCCTTGATGTCATTGGAAGCTTGGTAATACAAACCTCAGACTCTGTGAATAACCAGTTTCTTCTGAGAGACAAAGAGGACCAAGTTTGTAAATTGAGGATGCAGTACTCAATGAATGTCAAAGAAAAGGTTCTTCAGTACCCAAATTCTCCAGTGGAGGAGATTCTAATCCTAGGACAAAGGTTTTGCAGCAACATATTCAGAACCAAACAACTCTTTGTCACCAGAGTCGTACAAGCGTTAGTAGCTGGATTTGTACTAGGGACCATATTTTTTAATGTTGGCAACAGAAAAGATCGAGTAGCATTACAAACACGAAGTGGGTTTTTCGCTTTCAGCCTTACCTTTTTGTTATCTTCAACAACAGAAGGCCTGCCTATTTTCTTGGAAGAGAGAAGGACTTTGATGAAAGAGACCTCAAGAGGAGCTTATAGAGTTTCTTCCTATGTTTTAGCAAACACCCTTGTGTTCCTTCCTTTCCTTCTGATGGTTGGTCTTCTATATTCAACTCCAGTTTATTGGTTAGTAGGATTAAGGAAGGAAACTGATGGATTCCTATACTTTTCTCTAGTGGTTTGGTTGGTGGTCCTCATGTCAAATTCTCTTGTAGCTTGTTTCAGTGCTCTGGTGCCAAATTTCATCCTGGGAACCTCAGTAATTGCAGGGCTTATGGGTTCTTTCTTTCTGTTTTCAGGGTATTTCATATCAAAGGGAAACATACCCAAATACTGGATTTTTATGCACTATATGAGTATGTTCAAGTACCCGTTTGAGTGTTTTATGATAAATGAGTATGGAGGAGATCAAGGGAAAACCAGATGCTTAGAGAATAGTAATGGAGAGTGCAGTTTATATGGAGTGGAGTTCTTAAGACAGCAAGGTCTGACGGAGTCACAAAAATGGAGCAACTTGTCTGTGATGTTGGGGTTCATAATTGGGTATAGAGTGCTTTGCTTTTTGATTCTGTGGTGTAGATGCCATAGAACCAGAAAATAA 1854 0.4186 MGSPFKPISCPKKTQYRIETKNLSYRLCSQLDELRSLCFGSNPRKGAKLILKDLNCEAKPGELTAIAGPSGAGKTTLLEILAGRVSPCKISGQVLVNQRPMDSNRFRRTSGYVTQEDTLFPSLTVRETLMYSALLRLPGGRKMAAARVAELMKELGLDHIADSRIGGGGGGGSSNHGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALNIVSLLRLMAFNQGKTIVLTIHQPGFRILELFDHLVLLSDGFVMHNGSLNLLEARLKLAGHHIPLHVNVLEFALDVIGSLVIQTSDSVNNQFLLRDKEDQVCKLRMQYSMNVKEKVLQYPNSPVEEILILGQRFCSNIFRTKQLFVTRVVQALVAGFVLGTIFFNVGNRKDRVALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTLMKETSRGAYRVSSYVLANTLVFLPFLLMVGLLYSTPVYWLVGLRKETDGFLYFSLVVWLVVLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISKGNIPKYWIFMHYMSMFKYPFECFMINEYGGDQGKTRCLENSNGECSLYGVEFLRQQGLTESQKWSNLSVMLGFIIGYRVLCFLILWCRCHRTRK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0365 617 Gene3D - 12 276 IPR027417 -
Dere08g0365 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 269 IPR027417 -
Dere08g0365 617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 279 IPR003439 GO:0005524
Dere08g0365 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 16 602 - -
Dere08g0365 617 Pfam ABC transporter 51 206 IPR003439 GO:0005524
Dere08g0365 617 SMART AAA_5 60 256 IPR003593 GO:0016887
Dere08g0365 617 FunFam ABC transporter G family member 10 35 285 - -
Dere08g0365 617 CDD ABCG_EPDR 41 261 - -
Dere08g0365 617 ProSitePatterns ABC transporters family signature. 178 192 IPR017871 GO:0005524|GO:0016887
Dere08g0365 617 Pfam ABC-2 type transporter 340 551 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0365 Dere-ChrDere08 6141017 6142870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0365 31 266 Calmodulin-binding Proteins AT2G36910 29.098 1.82e-12 68.9