Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0364 ATGAGTTGTTTCTCTCTTCTTTTCAGAAAAAAAGGATCTGCCTCAGCCACACAATCAACCGAAATTGATATCGATGTTTCAGACATTCAGAATGTCAACCTTTACACATATAAGGAGCTGCGAATTGCCACCGAAGGTTTTAGTCCAGCAAACAAGATAGGACAAGGCGGTTTTGGATCTGTCTATAAGGGAAAGCTGAGAAATGGTACTCTAGCTGCTATAAAAGTGTTGTCAGCTGACTCAAATCAAGGGGTTCGGGAATTCCTGACAGAAATCAAGGTGATCACTAGTATAGAGCATGAGAACCTAGTTAAGTTGTTTGGATGCTGTGTGGAAGGAAATCACAGGATTTTGGTGTACGGCTATCTTGAGAACAACAGCCTAGCACGAACACTTCTTGGTGGAGGCCATAGTAGAATCCAATTCAGTTGGCCTGTACGGAGGAACATTTGCATTGGTGTTGCACGTGGCCTAGCATTCCTTCATGAGGATGTCCAGCCACACATTATTCATAGAGACATTAAAGCCAGCAATATACTACTCGACAAATACCTGCAGCCCAAAATTTCCGATTTTGGTCTTGCAAAGCTTATTTCATCAAACCTGACCCATATTAGTACACGTGTTGCTGGGACAGCTGGTTATCTGGCGCCTGAGTATGCCATACGAAGTCAAGTAACGAGAAGATCAGATGTCTACAGTTTTGGAGTTCTACTACTGGAAATTGTCAGTGGGAGGTGTAACACAAACAGACGGTTACCTGTTGAAGAACATTATCTTCTTCCAAAGGCATGGACTATGTATGAAAATGGAAATTTGGAGGGACTTGTGGATGCATTGCTAGAAGAAGACTTCAATGTTGAGGAGGCATGCAGGTTTTGTAAGATTGGTCTCCTTTGCACTCAGGATTCTCCTCAGCTCCGACCATCAATGTCTACTGTGCTTGGCATGTTGATGGGTGAAATTGATGTGGATAACAAGGAACTTACAAAACCGGGCTTAATATTTGAGTTTGTGGATGCCAATGATGAAAGAAAGCACAAAGCCAAGGCTGAAGTGGAAAATACATCTTCCCTTGCTGTCTCAGGGACAAAAGATGATTCATCTTCATCAGGAACCACGATGTCTTTTGCTACCATGACCTTCACTTCAATTTATGACCGAAGGATTTAA 1173 0.4246 MSCFSLLFRKKGSASATQSTEIDIDVSDIQNVNLYTYKELRIATEGFSPANKIGQGGFGSVYKGKLRNGTLAAIKVLSADSNQGVREFLTEIKVITSIEHENLVKLFGCCVEGNHRILVYGYLENNSLARTLLGGGHSRIQFSWPVRRNICIGVARGLAFLHEDVQPHIIHRDIKASNILLDKYLQPKISDFGLAKLISSNLTHISTRVAGTAGYLAPEYAIRSQVTRRSDVYSFGVLLLEIVSGRCNTNRRLPVEEHYLLPKAWTMYENGNLEGLVDALLEEDFNVEEACRFCKIGLLCTQDSPQLRPSMSTVLGMLMGEIDVDNKELTKPGLIFEFVDANDERKHKAKAEVENTSSLAVSGTKDDSSSSGTTMSFATMTFTSIYDRRI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0364 390 ProSiteProfiles Protein kinase domain profile. 47 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0364 390 MobiDBLite consensus disorder prediction 355 373 - -
Dere08g0364 390 Pfam Protein kinase domain 50 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0364 390 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 330 - -
Dere08g0364 390 FunFam cold-responsive protein kinase 1 17 122 - -
Dere08g0364 390 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Dere08g0364 390 MobiDBLite consensus disorder prediction 354 373 - -
Dere08g0364 390 Gene3D Phosphorylase Kinase; domain 1 17 122 - -
Dere08g0364 390 SMART serkin_6 47 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0364 390 Gene3D Transferase(Phosphotransferase) domain 1 123 331 - -
Dere08g0364 390 SUPERFAMILY Protein kinase-like (PK-like) 25 318 IPR011009 -
Dere08g0364 390 CDD STKc_IRAK 53 320 - -
Dere08g0364 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Dere08g0364 390 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0364 Dere-ChrDere08 6137765 6140269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0364 35 351 Receptor kinase-like Gene Family AT1G53430 53.312 3.12e-106 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere08g0364 Pkinase 4.5e-45 CL0016