Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0362 ATGTTACTCAGCAAAGAAATAGAGGATTTATGCGATGACAACTTTGAAGGATCTAATGATGAAAGACGGATTTTCACAGAGGTATTTTTCAGTAAAGACAATGTTCAGCCTAGCCAGAGGTGTCTTGTTACTGGAGCTATCAACTTTGAATGTGAATCTAGTAAAAACACAATTGGATCATTCTGTTCTAGTAATGAAAACTTAGTTATAACAAGCCCCTCTTCTTCAAAATTTACACATCCTGAGAAGGAGTATGATGTAATTCATCATTCCAAAGAGAGTGCTCTGGGTTGTATGCCTGAGAGATTGAATTATGAGGGGCAAAATGATGAGGATGTGAATGTCAAACGCATGAAGTTTTCCCTGCATGAACTTGCCTGTAGTAGATTTAATTTCGAAAAGGTTTTGAGTTCAGCAACACTCTCAAAAGAATTTGTTGCTGATGTGTCTCGTGCTGCTATACACTTTGATAAACCAATTTCATTTCATTTAGTTGAATCATCAAAGCATGGTGTGATATCCAGTTGCTATCTGTTGAAGCATAACATGATACTAAATAAAAAAGAAGCCAAGGGTGATGTAGATGTCACAAATTGTAAAAAAAACAGTGCAGATAGAAATGTTGCAAAGGCTGCAAGTAAAGTGGTTGCTTCTCCTGTTTCCCAAGAGAGCTTTGCAAACAGGCTTGCAGTAACAAGTCCATCAATCACTGCCGTGGAGAAGTCTGGATCTCATATACATTTTGAGGAAACACTCAAATTTTTATCTTCTGATACAATGTTTAATTTATCATTGGAGCCTGACAGTAAGAAGGACCCCCGTGAATTACTGCATTACTATAGTGTGCAGTTGCTAATGATGGCAGGATGGTCTATTGAGAAGCGTAAACGGCCTTGTAGACGTTACATGGAGTCAGTGTATAGGACACCAGAGGGGAGGCCAGTTCGTGAGTTTATAAAAGCTTGGAGATTATGTGGTCAGTTTTTGTCTGTTGACAAATACGCTTTAATGCAGGACAGTAAAGAATGGGCTGATATCAGTCAATTCTGGTCTGATCTATCCAGTGCACTGATAAATGTTGAAAAGGAAATGAACCAGTCAGAGCCTGCTGCTACATTGGCTTATCAATGGTGGCTTCTGGATCCTTTTGTAGTAGTCATTTTTGTTAAAAGAAAGATTGGTGCACTGAAAAAGGGGGAGCTAGTGAAATCAACTCGAAGTATAGTTTCTAGTAATTATAGGAAGGCATGTAGTGCCAACAGGTCAGCTTGGGAGGATACTTCTGCACCTCCATTTGATCAGAAACATGACTCAGCTTTTCTTTTTGATTCTTCTACTGCCACTGGGAGCACACTAATAACTTCTATGCTCAACTACCATGCCTGTGATCAGAAAACTGGTGGAAGAAATATTCTAGGATATGAAAAGACAGTTAATGAGGCAGTGAAACTTCCAAGATGTGAATATGTTAGTATTTGTAACCAGGAAGATATGTACATGGAACATGATGCTGACAGCATAGAAAATCAATGTAGGAAAATGTCTGCCAGTGAAAATAGCAGTCTGGTTGTAGTCTCATTACCTGATTGTAGGTTGGGGTTTACTGGTAAACAGTCAAAGACTTGCACTTTCAATGTTATTACAACTTCTGGAAATTCTAACGAGGCATTTGGAGGGCTTCAAGTTAACAATTGTCAGGAAAGTACTGTTAAAAGTTTTGAAAGCTCTGATGAACAGAGCTTGGAAAATTTATTGGAAACAAATAAGAGAGTTGGTGGAGATGTGCCAATGGACAAGTCAGTGGAAAAGGATGCACCAATTGAAGGCCAAGTTCAGGATCTCCTTGGAAGTAATCTGCAGGAATCCCTGAATGGCCATCCACATGAAGTAAGCCATAGCCTGGTTCATAGTCATGCCTCAGAGGCTGTTCAGCAGCCTGAATATGGGGAGGAAGATGGTGGGAAAAGTACAAGTGCTTCTGGGCTTGAGACAGATAACACATGTTCTGCCGCTGATTTTTCTCTGAAAAAGAAGATACGGAGGAAGTGTAAAAAGGTATCTGAAATCAAACTGAGTATGTTGTATGAAAGTGACATGATGGGTTCTACAGTTACTGATGAGTTTCAATTGCTGAATAATGAGGCATGTAGCACTCACTTAGAATTCGAAGAGGTCAAGTATCTAGTTGACGATGCAGAAAATAGAGGAGCCCACAGGAAATTATCATCTATCAGTTCATTCCAGCAACATGTTGGGAAAACAAATGCAAAGTTTAGAAAGACTTGTCAGAGGTATGACTCTGTAATTGTTGAACCCAAATCTAGTAGATGCCAGATTGAAGATGATGATCTGCTGGTTTCGGCTATTTTTAAGAAAAAAGGCTTCATCTCAAAGACAACTCAAGGTAATTCTAAATCTAAATCCTGCAAATCAAGAGCCCGGGCCCAGAGAAAGCTGAAAAGCCAGAAGGGTCATTGCAGGTTGCTACCAAGGAACCTTGGTAATGGAGGGAAGCACATTAAGGAAGGCAAAAGGTGTTATCTGGGGGCAAGAACAGTGCTATCCTGGTTGATTGAGAGTGGAATCATATGTTTAAATGATGTGATTCAATATCGAAGCCCTAAAGATAATGCTGTCATTAAAGATGGTAGGATTACCCGGGATGGTATTATATGTAGGTGCTGCAATAAGTTGCTGACATTATCTGAGTTCAAGCTTCATGCTGGGTTTAGACTGAATCGCCCCTGCTTGAATCTTTTCATGGAGTCTGGTGAGCCCTTTACATTGTGCCTGCTTCAAGCCTGGTCTGCTGAATACAAGATCCGGAAAAGTGGGAATCAAGCTGTGAAAGCTGATGATGATGATAAAAATGATGACTCATGTGGATTGTGTGGTGATGGGGGTGAGTTGATATGCTGTGATAACTGTCCGTCAGCTTTTCATCTTGCTTGTTTGTCCACTCAGGAGATCCCTGAAGGCAACTGGTACTGCACAAACTGCACTTGTTGGATATGTGAGAATTTTGTCAATGATAAAGAGGTTTCTGGTGCTTGTGATGCATTGCAATGTTTACAGTGTGAGCATAAATATCATGAGAAATGTCTGAGCAGAAGAGATAAACCAGAAGGGGAAGTTTCTGACACTTGGTTTTGTGGGGGACGTTGTCGGGAGGTATACTCTGGTCTTCAGTCTCGAGTTGGGTTTGTTAATCATGTTGCTGATGGCTTCTCATGGATGCTTCTTAGATGCATCCATGATGACCAAAAGGTTCATTCTGCCCAGTGGTTTGCCCTGAAGGCAGTTTGCAATACAAAATTAGCGGTTGCCCTCACCATCATGGAGGAATGTTTTTTGTCGATGGTTGATCCAAGAACAGGCATAGACATGATACCCCATGTTTTATACAATTGGGGGTCTGATTTTGCTCGCCTGAATTTTCAAGGGTTTTACACTGTGGTATTGGAGAAACAGGATGTGCTAATTTCTGTAGCATCTATCAGGGTGCATGGAACTACAGTTGCAGAGATGCCTCTTATTGCAACTTGCAGTCAGTATCGTCGGCAAGGAATGTGCCGACTCCTTGTGAGTGCAATTGAAGAGATGCTTATATCTGTCAAGGTAGCAAAGCTTGTGATAGCAGCCATTCCAGACTTAGTCGAGACTTGGACCAAGGGCTTTGGATTCAAACCCATGGATGATAGTGAAAAGCAGAAATTGAACAAAATCAACTTGATGGTTTTTCCTGGGACTGTATTACTTGATAAAACGTTGTTTGAGGAGGAGAAAATAGAAGGCGAAACAGGACAGTGTGGTCCTTCAACCTTAGCAACAGATGACTCGACCAATGTAGGTGTCTCTATTAAAGGAATGGCCATGGCTGAATCATGGCAGCAAGATGTTGGAAACGCTTCTGCTTATGAAATTGATGCTAAGTCAGCAACTAAAAATGTTCACAGTGAGAATTATACCGATGACATAGCTACATCATTGCAACAAGGTGTCGAAGACACCTGTACTGATGAAATTAGTGCTAAGGCAGAAACTGAACATATTTGTCGCAAGAATTTCCCAAATTACAAAGCTGGATGTGAAACCAGCATTGATGATCATATGCCAGTCGTTGACTCAACATTAGGATCCAAAGAAACAACAGAGATGGGTACCAATTTAATAGGAGAGAAGGTCATGGGCTTTGAAGATCAGTCTGGTGGCTCAGAGAAATCTGTCGAAGTGGACAATATGCAGGGATTGAAAATTAGCAGCAGAATGGAAACCAAAAATGAGTCTACTGTACGGTACTCTAGTGGGAACTGTTCTAACAACGATGGTACCGAATCAGGAGTAAGAATTATTGAGGACTGGAATATCAGAGTAGGTGAAGATCAGAAGCATGCCTTGCAGGGCCCGTTTTTGCAATTGTCCTGCAAAGCAGTATTAGGCAGCAATTTTGACGTGGATTCCAAACTTGAATCCTCGGTAATGTATGATGGAACACAGCTTTCTTTGGAACAGAATTCGCAGAAAGTATGTGAGATGAATGAATGA 4545 0.4081 MLLSKEIEDLCDDNFEGSNDERRIFTEVFFSKDNVQPSQRCLVTGAINFECESSKNTIGSFCSSNENLVITSPSSSKFTHPEKEYDVIHHSKESALGCMPERLNYEGQNDEDVNVKRMKFSLHELACSRFNFEKVLSSATLSKEFVADVSRAAIHFDKPISFHLVESSKHGVISSCYLLKHNMILNKKEAKGDVDVTNCKKNSADRNVAKAASKVVASPVSQESFANRLAVTSPSITAVEKSGSHIHFEETLKFLSSDTMFNLSLEPDSKKDPRELLHYYSVQLLMMAGWSIEKRKRPCRRYMESVYRTPEGRPVREFIKAWRLCGQFLSVDKYALMQDSKEWADISQFWSDLSSALINVEKEMNQSEPAATLAYQWWLLDPFVVVIFVKRKIGALKKGELVKSTRSIVSSNYRKACSANRSAWEDTSAPPFDQKHDSAFLFDSSTATGSTLITSMLNYHACDQKTGGRNILGYEKTVNEAVKLPRCEYVSICNQEDMYMEHDADSIENQCRKMSASENSSLVVVSLPDCRLGFTGKQSKTCTFNVITTSGNSNEAFGGLQVNNCQESTVKSFESSDEQSLENLLETNKRVGGDVPMDKSVEKDAPIEGQVQDLLGSNLQESLNGHPHEVSHSLVHSHASEAVQQPEYGEEDGGKSTSASGLETDNTCSAADFSLKKKIRRKCKKVSEIKLSMLYESDMMGSTVTDEFQLLNNEACSTHLEFEEVKYLVDDAENRGAHRKLSSISSFQQHVGKTNAKFRKTCQRYDSVIVEPKSSRCQIEDDDLLVSAIFKKKGFISKTTQGNSKSKSCKSRARAQRKLKSQKGHCRLLPRNLGNGGKHIKEGKRCYLGARTVLSWLIESGIICLNDVIQYRSPKDNAVIKDGRITRDGIICRCCNKLLTLSEFKLHAGFRLNRPCLNLFMESGEPFTLCLLQAWSAEYKIRKSGNQAVKADDDDKNDDSCGLCGDGGELICCDNCPSAFHLACLSTQEIPEGNWYCTNCTCWICENFVNDKEVSGACDALQCLQCEHKYHEKCLSRRDKPEGEVSDTWFCGGRCREVYSGLQSRVGFVNHVADGFSWMLLRCIHDDQKVHSAQWFALKAVCNTKLAVALTIMEECFLSMVDPRTGIDMIPHVLYNWGSDFARLNFQGFYTVVLEKQDVLISVASIRVHGTTVAEMPLIATCSQYRRQGMCRLLVSAIEEMLISVKVAKLVIAAIPDLVETWTKGFGFKPMDDSEKQKLNKINLMVFPGTVLLDKTLFEEEKIEGETGQCGPSTLATDDSTNVGVSIKGMAMAESWQQDVGNASAYEIDAKSATKNVHSENYTDDIATSLQQGVEDTCTDEISAKAETEHICRKNFPNYKAGCETSIDDHMPVVDSTLGSKETTEMGTNLIGEKVMGFEDQSGGSEKSVEVDNMQGLKISSRMETKNESTVRYSSGNCSNNDGTESGVRIIEDWNIRVGEDQKHALQGPFLQLSCKAVLGSNFDVDSKLESSVMYDGTQLSLEQNSQKVCEMNE 1514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0362 1514 Pfam Tify domain binding domain 883 933 IPR032308 -
Dere08g0362 1514 MobiDBLite consensus disorder prediction 644 663 - -
Dere08g0362 1514 Pfam PHD-finger 961 1002 IPR019787 -
Dere08g0362 1514 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1147 1233 IPR016181 -
Dere08g0362 1514 CDD PHD1_AIRE 961 1000 - -
Dere08g0362 1514 Gene3D - 1136 1245 - -
Dere08g0362 1514 SMART PHD_3 1002 1056 IPR001965 -
Dere08g0362 1514 SMART PHD_3 960 1001 IPR001965 -
Dere08g0362 1514 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 945 1019 IPR013083 -
Dere08g0362 1514 PANTHER PHD FINGER FAMILY PROTEIN 1 1344 - -
Dere08g0362 1514 SUPERFAMILY FYVE/PHD zinc finger 951 1001 IPR011011 -
Dere08g0362 1514 ProSiteProfiles Zinc finger PHD-type profile. 958 1003 IPR019787 -
Dere08g0362 1514 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1108 1250 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0362 Dere-ChrDere08 6086739 6096493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0362 1 407 PHD Transcription Factor Family AT3G14980 34.963 9.73e-55 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Dere08g0362 TDBD 4.5e-16 No_clan