Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0351 ATGGAAGATGAAATCAAAGGAAAAATCAGGAAGACAGTGTGCAGAATTCTGGAAGAATCAGACATGGATGAGGTCACCGAGTCCAAAATTAGGAAGCAGGCCACCAAAGAACTTAACCTTGACCTATCGCAGCCACATTACAAAGCTTTTGTGAAGCAGGTTGTGGAGTCTTTTCTTCAGGAAAAACAAGAGGAAGAGCAGCAACATCCACAAGAGGAAGCTGCTCAGGACCAGGAGTACGATGACAATGGCGATCTCATCATCTGCAAGCTTTCAGACAAGAGAAGGGTGACAATTCAAGATTTCAGAGGGAAAACTTTGGTCTCTATCCGGGAGTTCTATAGCAAAGATGGCAAAGAACTTCCTTCTTCCAAGGGAATAAGTTTGACAGAAGAGCAGTGGTCTGCCTTAAAGAAAAATATACCTGCCATAGAAAAAGCCATTGAGAAAATGGAGTCACAAAACATATAA 471 0.4225 MEDEIKGKIRKTVCRILEESDMDEVTESKIRKQATKELNLDLSQPHYKAFVKQVVESFLQEKQEEEQQHPQEEAAQDQEYDDNGDLIICKLSDKRRVTIQDFRGKTLVSIREFYSKDGKELPSSKGISLTEEQWSALKKNIPAIEKAIEKMESQNI 156
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0351 156 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 153 IPR045125 GO:0003713|GO:0060261
Dere08g0351 156 Pfam Transcriptional Coactivator p15 (PC4) 89 140 IPR003173 GO:0003677|GO:0006355
Dere08g0351 156 MobiDBLite consensus disorder prediction 61 76 - -
Dere08g0351 156 Pfam DEK C terminal domain 8 59 IPR014876 -
Dere08g0351 156 SUPERFAMILY ssDNA-binding transcriptional regulator domain 88 150 IPR009044 GO:0003677|GO:0006355
Dere08g0351 156 MobiDBLite consensus disorder prediction 61 81 - -
Dere08g0351 156 SUPERFAMILY DEK C-terminal domain 8 60 - -
Dere08g0351 156 FunFam RNA polymerase II transcriptional coactivator KELP 78 154 - -
Dere08g0351 156 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 3 60 IPR014876 -
Dere08g0351 156 Gene3D - 3 62 - -
Dere08g0351 156 PIRSF RNA_polymII_KELP 1 155 IPR017415 -
Dere08g0351 156 Gene3D Transcriptional Coactivator Pc4; Chain A 78 155 IPR009044 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere08g0351 Dere-ChrDere08 5987717 5989366 Dispersed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Dere08g0351 DEK_C 3e-15 No_clan