Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0342 ATGGATGATTACGGCAGAAAGTTTCGCCCTGAACTGAAGACAAGCGTTGTCATGGGCTATCGAGAATGCCATCTTCGAAGTTCTGATAAAACGGTACCCAGATCAGCAAATAGAAGAGAGGACTGCAAGAGCGTGAATCTCCAATTATTGTGTGCACGCGTCATCTCCTGGAGTCTCATCAGAGACGCTATATTGCCACACAAAGCAATCCCAAAAGCCACCCACAGAGCTGGTCGGCTCGACGCCGTGACGATGAGCCTCACCGTGCGAGCGTGTGGGATCAACCCCACATCACCAACTAGCAGCAGTTTCAGTTTCGGCCGCTTCTACGAGTCCTGGTTCGACCACCTGCAGCACCTACTCCACCAGCTGTCCGCCACCACTCGGCCGCCGCTCACGGCGGAGGACAGCCACGAGCTGCTCATCCTCATCGACAAGGTGATGTCCCACTACGACGAATACTACCGCACCAAGTCCGTCGCCACCCACGCCGACCCCCTCCACGTGCTGGTCTCCCCTTGGGCCTCCTCCCTTGAACGCTCCCTTCACTGGATCGCCGGCTGGCGCCCCACCACCGCCTTCCACCTCGTCTATACTGAGTCCTCTGTCCTCTTCGAGTCCCGCATCATCGATATCCTCCGTGGCCTTCGTACCGGCGATCTCGGTGATCTCTCCCCCTCTCAGTTCCGGCGAGTCAGCCAATTGCAATGTGATACCGTTAAGGAAGAGAATGCGATAACGGAGGAGCTATCAGAGTGGCAAGACAGCGCAAGTGAGCTGATAGATGGGGAGGGGGACATGGAGGAGAAGATCGGACGGTTGGTGAGCATCATAAGGAAAGCGGACGATCTACGGCTGAGAACCATCAAGAGCGTGGTGGGCCTCCTCACTCCACAGCAAGCCGTCGAGTTCCTGATCGCCTCCGCCGAGTTGCTCTCCGGGATTCGCGCCTGGGGAATCAATCTCGACCGTCCACGTCTCAGACAATCAACCCTCGCTTCCCCAAGAAATGAAATTCATGCTGGCGTTTGTGAGTGA 1038 0.5674 MDDYGRKFRPELKTSVVMGYRECHLRSSDKTVPRSANRREDCKSVNLQLLCARVISWSLIRDAILPHKAIPKATHRAGRLDAVTMSLTVRACGINPTSPTSSSFSFGRFYESWFDHLQHLLHQLSATTRPPLTAEDSHELLILIDKVMSHYDEYYRTKSVATHADPLHVLVSPWASSLERSLHWIAGWRPTTAFHLVYTESSVLFESRIIDILRGLRTGDLGDLSPSQFRRVSQLQCDTVKEENAITEELSEWQDSASELIDGEGDMEEKIGRLVSIIRKADDLRLRTIKSVVGLLTPQQAVEFLIASAELLSGIRAWGINLDRPRLRQSTLASPRNEIHAGVCE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0342 345 ProSiteProfiles DOG1 domain profile. 103 325 IPR025422 GO:0006351|GO:0043565
Dere08g0342 345 Pfam Seed dormancy control 117 199 IPR025422 GO:0006351|GO:0043565
Dere08g0342 345 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 105 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0342 Dere-ChrDere08 5894883 5898267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0342 82 326 bZIP Transcription Factor Family AT1G08320 26.275 1.90e-22 95.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0342 08 5894883 5898267 Dere08g0342 08 5894883 5898267 ECH