Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0327 ATGAAGAAACAGTCGTCTTTGGAAGCCAAAAGGGCAATCATCGAAGAGCTCGTGAGAGGCCGTCACTTCGCGAACCAGTTGCTTCAACTTGTTCGTCGCAGCTCCAAATATAAGGAAGATGAAGAGTCCTTATTAGTTTTATTTCCGTTTGCTGAAGATCTCGTGAAGAAGATTCTTAGATCTTTCACAGACACCCTCTTGCTCGTCAACACCAACTTTGACTTTCATGATGTCGATTCCTTCATAGATTCTTCTTCGGAAAGAAAAATTTGTGAAAAATCGAAGGATCGGGATTTGGATGAAAGTTGCAACAAGAGCTTGATCAAAAGAGACCAAAGAGGCTGTCACAAGAGAAAGAACTACTATAGATGCGGTCACAAGTACGATGAGGGTTGCTCAGCAATGAAACACGTTCAAAGAATACAAGACAATCCTCCCTTATACCGAACCACCTATTCTGGCCTTCATACTTGCAAAAACAAGCTGCTCTCTGAGATAGCTTTGGATCTTACTTCTCCTTCTGACTCCTCCATAATACTTAGCTTCAACAACACTAGTACCCTTCCATGTAAACAAGACTCCCACCCCTTTTTCTCATCATCATCGACCAACAAGGAGCATATAGAGGAAGAGACTCCCAATGATATTCATCATGTTGATGTGGAACAAAACCAAGTTTCCCAACACGAACATCTCACTGTGTTATCCTCAACCTTGGATCTGTTTTCTTCTCTCAAGTTTGAATCTTATCATGAAATGGATGATGCGCTTATGAGGTGTTTTTATTTTGATGACTTCATACGTTTTGGCCCATGA 816 0.4118 MKKQSSLEAKRAIIEELVRGRHFANQLLQLVRRSSKYKEDEESLLVLFPFAEDLVKKILRSFTDTLLLVNTNFDFHDVDSFIDSSSERKICEKSKDRDLDESCNKSLIKRDQRGCHKRKNYYRCGHKYDEGCSAMKHVQRIQDNPPLYRTTYSGLHTCKNKLLSEIALDLTSPSDSSIILSFNNTSTLPCKQDSHPFFSSSSTNKEHIEEETPNDIHHVDVEQNQVSQHEHLTVLSSTLDLFSSLKFESYHEMDDALMRCFYFDDFIRFGP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0327 271 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 119 194 IPR044810 GO:0003700
Dere08g0327 271 SUPERFAMILY WRKY DNA-binding domain 113 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere08g0327 271 ProSiteProfiles WRKY domain profile. 113 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere08g0327 271 SMART WRKY_cls 111 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere08g0327 271 Pfam WRKY DNA -binding domain 114 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere08g0327 271 Gene3D WRKY domain 85 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0327 Dere-ChrDere08 5627424 5629028 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0327 6 159 WRKY Transcription Factor Family AT1G80590 30.625 3.50e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere08g0327 WRKY 2.3e-10 CL0274