Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0325 ATGGAGAAAGAGAAGAACGAGCCTTCTTTAGAAGGCAAAAAGGCAATAATTATACAAGAGCTTGTGAGAGGACGTAAGTTTGCGAACCAGTTGCTTCAACTAGTTTGTCATGGATCCAACAAGGGAGATCAAGAGTCCTTAATAACTATACGTCCATTTGCTGAAGATCTTGTGAGAAAGATTCATGGATCATTCACAAACACCCTCTTGCTCTTCAACACCAATCATCACAATCTTGATCACTCCGATGATGTCTTATTCATAGACTCTTCTTCGGTTTGGAATATTCGCGAAAAATCCGAGGATCATGATTTGGATGAGACTTACAAGAGCTTGAGCAAAAGAGACGAAAGAGTCTGTCGCAAGAGAAAGAACTACTACAGGTGCAGTCACAAGTACGATGAGGGTTGCCCAGCAATGAAACAGGTTCAGAGAATACAAGACAATCCTCCCTTATATCGAACCACCTATTTTGACCTTCATATTTGCAACCATGACAACCACTTCACTCACTATTTGGATGATCCTTCTTCTCCTTCTGATCATTCCTCCATACTACTTAGCTTCGACAACGCTGCTCTTCAAAATCAACAGGCCTACCCCCCCTTTTTCTCATCATCTTCACCTAAGAAGGAGCATCATCAGCGAGAACATATTGTTGATGTGGAACAAAACCAAGTCTCTCGACATGATCATGCCACTGCGTTATCCTCAACCTTCGATCTGTTTTCTTCTCTCAAGTTTGAATCTTTCGGAGTGGACGATGACGATGTGCTACAAAGGTGTTTTGATTTTGATGAGCTTTTTCGTTTTGGTCTATGA 822 0.4148 MEKEKNEPSLEGKKAIIIQELVRGRKFANQLLQLVCHGSNKGDQESLITIRPFAEDLVRKIHGSFTNTLLLFNTNHHNLDHSDDVLFIDSSSVWNIREKSEDHDLDETYKSLSKRDERVCRKRKNYYRCSHKYDEGCPAMKQVQRIQDNPPLYRTTYFDLHICNHDNHFTHYLDDPSSPSDHSSILLSFDNAALQNQQAYPPFFSSSSPKKEHHQREHIVDVEQNQVSRHDHATALSSTFDLFSSLKFESFGVDDDDVLQRCFDFDELFRFGL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0325 273 Pfam WRKY DNA -binding domain 122 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere08g0325 273 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 124 177 IPR044810 GO:0003700
Dere08g0325 273 SMART WRKY_cls 120 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere08g0325 273 Gene3D WRKY domain 108 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere08g0325 273 ProSiteProfiles WRKY domain profile. 124 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere08g0325 273 SUPERFAMILY WRKY DNA-binding domain 123 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0325 Dere-ChrDere08 5612162 5613863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0325 18 163 WRKY Transcription Factor Family AT5G01900 30.000 1.26e-14 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere08g0325 WRKY 1.4e-09 CL0274