Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0323 ATGGAGGCTACGCAGAACCTAAATGATCGGCATATAATTGGCAGAGGAGCACATGCAGTTGTTTATAAAGTTTCACTGGATTCAGAAAATGACTATGGCCTCATTGTGTACACCTACATGCAAAATGGAAGCCTTCTTGATGTTTTGCATGAAATGAATCCACCAACATCCTTGGTGTGGAGCATTCGCTATAAGATAGCTTTTGGAATTGCAAATGGACTGGCATACCTCCATTATGATTGTCATACTGTCATAGTTCTGGATCAATCCTCTGCTTCAACAAAGTCTATGGCTGTTCCTGGTACAGTGGGGTATATTGCACCAGAGAATGCATATACAACTCTAGTGAGCGGGGAATCTGATGTAATTAGTTATGAAGTAGTTTTGCTTGAGCTAATAATCAGAAAGGTGTTGGATTCTTCATTTATTGAGGGAACAGATATAGTGGGGTGTGTTAGATCTGTATGGAAAGAAACTAGAAAAATTGAGTTAATTCTTGATTCAAGCATTGCTAAGGAATTCTGGGATTCAGATGTAAGGGAACAAGTTGAGCAAGTGCTTTTGGTGGCTCTGAGATGTACTGAGAAGGATCTAAGTAAGAGACCCACCATGAAAGAAGTCATCAAGCAATTGATTATTAGATAG 645 0.3938 MEATQNLNDRHIIGRGAHAVVYKVSLDSENDYGLIVYTYMQNGSLLDVLHEMNPPTSLVWSIRYKIAFGIANGLAYLHYDCHTVIVLDQSSASTKSMAVPGTVGYIAPENAYTTLVSGESDVISYEVVLLELIIRKVLDSSFIEGTDIVGCVRSVWKETRKIELILDSSIAKEFWDSDVREQVEQVLLVALRCTEKDLSKRPTMKEVIKQLIIR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0323 214 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0323 214 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 91 211 - -
Dere08g0323 214 Gene3D Transferase(Phosphotransferase) domain 1 87 213 - -
Dere08g0323 214 SUPERFAMILY Protein kinase-like (PK-like) 3 212 IPR011009 -
Dere08g0323 214 Gene3D Transferase(Phosphotransferase) domain 1 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0323 Dere-ChrDere08 5586077 5587026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0323 1 211 Receptor kinase-like Gene Family AT1G73080 39.100 1.12e-52 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere08g0323 None None None