Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0322 ATGGAGAATGATGCTTCTTCAGATCTTAACAAGGCCATCATAGAGGAGCTTATCAAAGGGAGAGAATTCGCCAACCAGTTGCTTGAACTTGTTCATCATCATGGATCCAATATTATGGGAGACGATGAGGGCTCTTTATCAATTCCATTTGCTCAAGATCTTGTGGACAACATACTTAGATCATTCGGAAACACCCTTCTGCTCTTCAATTATGAGTTTGACTCCCATGAGATCTCCATCAGTGCTTGCCCAAAATCTGAGGAGGACGATGATTTGGATGAGAGGTGCAAGAATTCGGGCACAGAAAGAAACCGAAGAGGCTGTTACAAGAGAAAGAACTATTACAGGTGCAGTCACAAGTTCGACGAGGGTTGCCCAGCAATGAAACAGGTCCAGAGAATACAAGACAATCCTCCCTTATATCGAACCACCTATTTTGGCCTTCATACTTGCAAAAACAAACTGCTCTCTGAGATGGCTTCGGATCTCAATTCTCCTTCTGACTCTTCCATTCTACTTAGCTTCAATAGCACAACTACCCTTCCATGTAAACAAGATCCCAACCCCTTTTTTTCATTATCTTCAACCAAGAAGGATCAAAACGAGGAAGAGATCCCCAATGATCATCATGTTGATGTGGAACAAAACCAAGTCTCCCAATACGAACATGTCACTGTGTTATCCTCAACCTTGGATCTGTTTTCTTCTTTCAAGTTTGAATCTTATCATGAAGTGGATGACGTTCTTTTGAGGTGTGTTTGA 762 0.4186 MENDASSDLNKAIIEELIKGREFANQLLELVHHHGSNIMGDDEGSLSIPFAQDLVDNILRSFGNTLLLFNYEFDSHEISISACPKSEEDDDLDERCKNSGTERNRRGCYKRKNYYRCSHKFDEGCPAMKQVQRIQDNPPLYRTTYFGLHTCKNKLLSEMASDLNSPSDSSILLSFNSTTTLPCKQDPNPFFSLSSTKKDQNEEEIPNDHHVDVEQNQVSQYEHVTVLSSTLDLFSSFKFESYHEVDDVLLRCV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0322 253 Gene3D WRKY domain 76 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere08g0322 253 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 112 169 IPR044810 GO:0003700
Dere08g0322 253 Pfam WRKY DNA -binding domain 109 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere08g0322 253 SUPERFAMILY WRKY DNA-binding domain 106 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere08g0322 253 ProSiteProfiles WRKY domain profile. 86 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere08g0322 253 SMART WRKY_cls 72 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0322 Dere-ChrDere08 5583363 5584555 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0322 8 151 WRKY Transcription Factor Family AT3G56400 29.843 2.13e-17 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere08g0322 WRKY 1.8e-11 CL0274