Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0311 ATGTCAAGCTCCAAACTTTGCTCTGTTTTGTTGTTTGTGTTTGTGGTTTTGAGTTTCCTCGCAGAGTTTGGATCAAACGCTCAACTTATACCACCAGATGAAGTGAAAACTCTGCAAGCGATATCGGATAAGCTTACGAACGTGAATTGGAAAGTGAGCCGGCAATCATGCAATGGAGGTGTGGGATTCAATAATACAGTTTCAGTGCCCAAGCGAGTCATTAGAAATGTTACTTGCAATTGCACTTTCCAAAGCGGCACCGTTTGCCATGTTACAAACATCACGCTGATAGGTCAGAATATATCAGGAGTTATACCAAAGGAATTCGGAAATCTTGCTCAACTTATACAACTTGATCTCACTCTCAACTACCTTAGTGGCTCAATTCCAACGATTTTCACACGAATCCCTATTGTCACTCTGGCCCTTCTTGGGAATCGACTTAGTGGTCAAATTCCGGCGGGAATTGGTGATATTGTTAGCCTGAGAGAGCTGATCTTGGAAAATAATCAGCTTGGAGGACATCTTCCCCCCAACCTTGGAAATTTGAGCAACTTATGGAGATTACTTCTTTCGTCAAATAATTTTACAGGGACAATACCAGAAACGTTTGGCAAACTAAAGAACCTAACTGATTTTAGGATAGATGGGAATAGCTTATCAGGAAAGATACCAAGTTTTATTGGGAACTGGACCAAAATTCAGATACTGAATATGCAGGGCACAGGCATGGAAGGCCCAATTCCTTCCACCATATCAGAGTTGAAAAATTTGACCGAATTGAGAATATCTGACTTGAAAGGAACAACTACAATGAAATTTCCTAATCTGAAAGATTTGACAAGCTTGCAATATTTGATATTGAGAAATTGCTTAATAACTGGTCATATTCCAAATGACATTGTTGGAAGGACGACCTTAAATACTCTAGACCTGAGCTTCAACATGTTAACTGGTCCAATCCCTGATTCATTTCAGCAATTTGAAAAACTAAATTTTATGTTTCTAACTAACAATTCTCTGAGTGGAGCAATTCCAAGTTGGACATCAGATAGCAGAATAAACATTGATTTATCTTACAACAGTTTTACAGAATCTTCTGCAGCTGACTGCCAGCTATTGAACGTAAACTTGGCTTCCAGCCTCTCATCTTCAAAAAGCAATTCAATCTCTTGTTTGAGGAAGGGCCTACCTTGTGCAGGAAAACCGCAGTATCATTCGTTTTTCATAAACTGCGGAGGTCCCATTACGAATTTTGAGGGAAATGAATATGAAGCAGACGAACACCGAGAAGGAGTTTCGAACTTTGTTCGAAGTGATAAATGGGCTTATAGCAGCACAGGAGTATATGTGTATAATGATAAAGAACCTAATCTAGCGACAAATACATTTTTGTCGAACATTAATGGTTCAACATATTACCAAACAGCTCGCCTTAGCCCACTGTCACTTAGGTACTATGGCCTTTGTATGCTGAGGGGTAATTATAAAGTAAAGCTCCATTTTGCTGAGATAATGTTTTCAGATGACCACACATTTAGTAGCCTCGGTAGGCGTATTTTTGATGTTTCAATTCAAGGTTTTAAGCATTTGAAAGATTTTGACATTGCAAAGGCAGCTGGAGGAGTTAATAAAGGCATCCCTAAGGAATTTGATGTTGATGTGAATGAAACCACCTTAGAGATCCATTTATATTGGGCAGGGAAAGGAACTACTGCCATTCCTCACAGAAGTGTATATGGACCTCTTATATCTGCCATAACGGTAACCCCAAACTTCGAAATTCCTTCAAATGGGCTTTCTGTTGGAGCTATTGTTGGAATTGTGGCGGGCTCATGTGTTTTCCTTGTATTGGTACTCATTGTCCTTCGAAAGAAGGGTTTCCTTGGTGGGGAAGATCCAAAAGACAAAGAGCTTCTAGATCTTAAAACTGGTTATTTTTCTCTAAGACAAATTAAAGCTGCCACTAATAACTTTGACCCAGCAAATAAGATAGGAGAAGGAGGCTTTGGGCCAGTATACAAGGGTGTATTGTCAGATGGTGTTGTCATTGCTGTTAAGCAACTCTCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTATTAACGAAATAGGAATGATATCTGCTTTGCAACATCCGAATCTCGTGAAGCTTTATGGCTGTAGCATTGACGGAAACCAATTGCAGCTTATATATGAATACATGGAGAACAATAGTCTTGCTCGAGCACTTTTTGGTCCTCACAATCAAAGGCTACACTTGGACTGGCCCACAAGAATGAAGATTTGCCAAGGGATAGCAAGGGGATTAGCTTATCTTCATGAAGAATCGATGTTAAAAATAGTACATAGGGACATTAAGACAACGAACATTTTACTTGATAGGGATTTGAATGCTAAAATCTCTGACTTTGGTTTAGCCAAACTCGATGAAGAAGAAAATACCCATATCAGCACACGAATAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCTATGCGGGGTTACTTGACTGATAAAGCAGATGTTTATAGCTTTGGAGTTGTTGTTTTGGAAATTGTTAGCGGAAAGAGCAACACAAAATATAGGCCAAAAGATGAGTTCATTTATCTTCTTGATTGGGCTTATGTTCTCCAAGAGCAAGGAAACCTTCTTGAGCTGGTGGATCCGAGTCTCGGTTCTAGCTATTCCCAAGATGAGGTCATGAGAATGCTGAACTTGGCACTCTTGTGTACCAACCCATCTCCCACTCTCAGACCGTCCATGTCATCTGTAGTGAGCATGCTTGAAGGACAAGCTCCAATCCAAGCACCAGTCATCAAGCGCAAAGATTCAAGCCGGGATCAAGATGCAAGGTTCAAATCCTTTGAGATGCTTTCACATGACAGCCAGACATCTAAAGGCTCTCAAGAAAGTATGGAGCAAAGAGGCCAGTCAATGGATGGGCCATGGACTGACTCCTCAATGTCTCTGTCAAGTAAAGATGTTTTTTCTCCATCCAGTAGGCTTCTTCGAGAATAG 3024 0.4031 MSSSKLCSVLLFVFVVLSFLAEFGSNAQLIPPDEVKTLQAISDKLTNVNWKVSRQSCNGGVGFNNTVSVPKRVIRNVTCNCTFQSGTVCHVTNITLIGQNISGVIPKEFGNLAQLIQLDLTLNYLSGSIPTIFTRIPIVTLALLGNRLSGQIPAGIGDIVSLRELILENNQLGGHLPPNLGNLSNLWRLLLSSNNFTGTIPETFGKLKNLTDFRIDGNSLSGKIPSFIGNWTKIQILNMQGTGMEGPIPSTISELKNLTELRISDLKGTTTMKFPNLKDLTSLQYLILRNCLITGHIPNDIVGRTTLNTLDLSFNMLTGPIPDSFQQFEKLNFMFLTNNSLSGAIPSWTSDSRINIDLSYNSFTESSAADCQLLNVNLASSLSSSKSNSISCLRKGLPCAGKPQYHSFFINCGGPITNFEGNEYEADEHREGVSNFVRSDKWAYSSTGVYVYNDKEPNLATNTFLSNINGSTYYQTARLSPLSLRYYGLCMLRGNYKVKLHFAEIMFSDDHTFSSLGRRIFDVSIQGFKHLKDFDIAKAAGGVNKGIPKEFDVDVNETTLEIHLYWAGKGTTAIPHRSVYGPLISAITVTPNFEIPSNGLSVGAIVGIVAGSCVFLVLVLIVLRKKGFLGGEDPKDKELLDLKTGYFSLRQIKAATNNFDPANKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCSIDGNQLQLIYEYMENNSLARALFGPHNQRLHLDWPTRMKICQGIARGLAYLHEESMLKIVHRDIKTTNILLDRDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVVLEIVSGKSNTKYRPKDEFIYLLDWAYVLQEQGNLLELVDPSLGSSYSQDEVMRMLNLALLCTNPSPTLRPSMSSVVSMLEGQAPIQAPVIKRKDSSRDQDARFKSFEMLSHDSQTSKGSQESMEQRGQSMDGPWTDSSMSLSSKDVFSPSSRLLRE 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0311 1007 Gene3D Phosphorylase Kinase; domain 1 631 734 - -
Dere08g0311 1007 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 405 592 - -
Dere08g0311 1007 Gene3D Transferase(Phosphotransferase) domain 1 735 953 - -
Dere08g0311 1007 Gene3D Ribonuclease Inhibitor 270 382 IPR032675 -
Dere08g0311 1007 Gene3D Ribonuclease Inhibitor 165 269 IPR032675 -
Dere08g0311 1007 FunFam Putative LRR receptor-like serine/threonine-protein kinase 735 942 - -
Dere08g0311 1007 SMART serkin_6 659 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0311 1007 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 200 267 - -
Dere08g0311 1007 SUPERFAMILY Protein kinase-like (PK-like) 644 944 IPR011009 -
Dere08g0311 1007 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 631 734 - -
Dere08g0311 1007 MobiDBLite consensus disorder prediction 957 1007 - -
Dere08g0311 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Dere08g0311 1007 Gene3D Ribonuclease Inhibitor 35 160 IPR032675 -
Dere08g0311 1007 Gene3D - 406 592 - -
Dere08g0311 1007 CDD STKc_IRAK 665 932 - -
Dere08g0311 1007 Pfam Protein tyrosine and serine/threonine kinase 663 929 IPR001245 GO:0004672|GO:0006468
Dere08g0311 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 968 - -
Dere08g0311 1007 SUPERFAMILY L domain-like 72 394 - -
Dere08g0311 1007 MobiDBLite consensus disorder prediction 959 1007 - -
Dere08g0311 1007 ProSiteProfiles Protein kinase domain profile. 659 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0311 1007 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 34 199 - -
Dere08g0311 1007 Pfam Malectin domain 408 587 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0311 Dere-ChrDere08 5457252 5470086 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0311 9 997 Receptor kinase-like Gene Family AT1G53440 62.076 0.0 1219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere08g0311 PK_Tyr_Ser-Thr 3.6e-48 CL0016