Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0309 ATGGAGGTTTGGGATTCAATAATACAGTTTCAGTGCCCAAACGAGTCATTAGAAATGTTACTTGCAATTGCACTTTCCAAAGCGGCACCGTTTGCCATGTTACAAACATAGTTTGTGAATGATAGCACGCTGATAGGTCAGAATATATCAGGAGTCATACCTGTTGAATTCGGAAATCTCGCTCAACTTATAAAACTTGATCTCACTCTCAACTACCTTAGTGGCTCAATTCCAACGATTTTCACACGAATCCCTATTGTCACTCTGGCCCTTCTTGGGAATCGACTTAGTGGTCAAATTCCGGCGGAAATTGGTGATATTGTTAGCCTGAGAGAGCTACTTCTTTCGTCAAATAATTTTACAGGGACAATACCAGAAACGTTTGGCAAACTAAAGAACCTAACTGATTTGATAGATGGGAATAGCTTATCAGGAAAGATACCAAGTTTTATTGGGAACTGGACCAAAATTCAGATACTGAATATTCAGGGCACAGGCATGGAAGGCCCAATTCCTTCCACCATATCAGAGTTGAAAAATTTGACCGAATTGAGAATATCTGACTTGAAAGGAACAACTATGACAAAATTTCCTGATCTGAAAGATTTGACAAGCTTGCGATATTTGATATTGAGAAATTGCTTAATAACTGGTCATATTCCAAATGATATTGTTGGAAGGACGACCTTAAATACTCTAGACCTGAGCTTCAACATGTTAACTGGTCCCGTCGCTGATTCATTTCAGCAATTTGAAAAACTAAATTTCATGTTTCTAACTAACAATTCTCTGAGTGGAGCAATTCCAAGTTGGACATCAGATAGCAGAATAAACATTGATTTATCTTACAACAGTTTTACAGAATCTTCTGCAGCTGACTGCCAGCTATTGAACGTAAACTTGGCTTCCAGCCTCTCATCTTCAAAAAGCAATTCAATCTCTTGTTTGAGGAAGGGCCTACCTTGTGCAGGAAAACCGCAGTATCATTCGTTTTTCATAAACTGCGGAGGACCCATTACGAAATTTGAGGGAAATGAATATGAAGCAGATGAACACCGAGAAGGAGTTTCGAACTTTGTTCGAAGTGATAAATGGGCTTATAGCAGCACAGGAGTATATGTGTATAATGATAAAGAACCTAATTTAGCGACAAATACATTTTTGTCGAACATTAATGGTTCAACATATTACCAAACAGCTCGCCTTAGCCCACTGTCACTTAGGTACTATGGCCTTTGTATGCTGAGGGGTAATTATAAAGTAAAGCTCCATTTTGCTGAGATAATGTTTTCAGATGACCACACATTTAGTAGCCTCGGTAGGCGTATTTTCGATGTTTCAATTCAAGGTTCTAAGCATTTGAAAGATTTTGACATTGCAAAGGCAGCTGGAGGAGTTAATAAAGGCATCACTAAGGAATTTGATGTTGATGTGAATGAAACCACCTTAGAGATCCATTTATATTGGGCAGGGAAAGGAACTACTGCCATTCCTCACAGAAGTGTATATGGACCTCTTATATCTGCTATAACGGTGACCCCAAACTTCAAAATTCCTTCAAATGGGCTTTCTGTTGGAGCTATTGTTGGAATTGTGGCGGGATCATGTGTTTTCCTGGTATTGGTGCTCATTGTCCTTCGAAAGAAGGGTTTCCTTGGTGGGGAAGATCCAAAAGACAAAGAGCTTCTAGATCTTAAAACTGGTTATTTTTCTCTAAGACAAATCAAAGCTGCCACTAATAACTTTGACCCAGCAAATAAGATAGGAGAAGGAGGCTTTGGGCCAGTATACAAGGGTGTATTGTCAGATGGTGTTGTCATTGCTGTTAAGCAACTCTCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTATTAACGAAATAGGAATGATATCTGCTTTGCAGCATCCGAATCTCGTGAAGCTTTATGGTTGTAGCATTGACGGAAACCAATTGCAGCTTATATATGAATACATGGAGAACAATAGTCTTGCTCGAGCACTTTTTGGTCCTCACGATCAAAGGCTACACTTGGACTGGCCCACAAGAATGAAGATTTGTCAAGGGATAGCAAGGGGATTAGCTTATCTTCATGAAGAATCGACGTTAAAAATAGTACATAGGGACATTAAGACCACGAACATTTTACTTGATAGGGATTTGAATGCTAAAATCTCTGACTTTGGTTTAGCCAAACTCGATGAAGAAGAAAATACCCATATCAGCACACGAATAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCTATGCGGGGTTACTTGACTGATAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCTTTGGAAATTGTTAGTGGAAAGAGCAACACAAAATATAGGCCAAAAGATGAGTTCATTTATCTTCTTGATTGGGCTTATGTTCTCCAAGAGCAAGGAAACCTTCTTGAGCTGGTGGATCCGAGTCTCGGTTCTAGCTATTCCCAAGATGAGGTCATGAGAATGCTGAACTTGGCACTCTTGTGTACCAACCCATCTCCCACTCTCAGACCGTCCATGTCATCTGTAGTGAGCATGCTTGAAGGACAAGCTCCAATCCAAGCACCAGTCATCAAGTGCAAAGATTCAAGCTGGGATCAAGATGCAAGGTTCAAATCCTTTGAGATGCTTTCACATGACAGCCAGACATCTAAAGGCTCTCAAGAAAGTATGGAGCAAAGAGGCCAGTCAATGGATGGGCCATGGACTGACTCCTCAATGTCTCTGTCAAGTAAAGATGTTTTATCTCCATCTAGTAGGCTTCTTCGAGAATAG 2793 0.401 MEVWDSIIQFQCPNESLEMLLAIALSKAAPFAMLQTXFVNDSTLIGQNISGVIPVEFGNLAQLIKLDLTLNYLSGSIPTIFTRIPIVTLALLGNRLSGQIPAEIGDIVSLRELLLSSNNFTGTIPETFGKLKNLTDLIDGNSLSGKIPSFIGNWTKIQILNIQGTGMEGPIPSTISELKNLTELRISDLKGTTMTKFPDLKDLTSLRYLILRNCLITGHIPNDIVGRTTLNTLDLSFNMLTGPVADSFQQFEKLNFMFLTNNSLSGAIPSWTSDSRINIDLSYNSFTESSAADCQLLNVNLASSLSSSKSNSISCLRKGLPCAGKPQYHSFFINCGGPITKFEGNEYEADEHREGVSNFVRSDKWAYSSTGVYVYNDKEPNLATNTFLSNINGSTYYQTARLSPLSLRYYGLCMLRGNYKVKLHFAEIMFSDDHTFSSLGRRIFDVSIQGSKHLKDFDIAKAAGGVNKGITKEFDVDVNETTLEIHLYWAGKGTTAIPHRSVYGPLISAITVTPNFKIPSNGLSVGAIVGIVAGSCVFLVLVLIVLRKKGFLGGEDPKDKELLDLKTGYFSLRQIKAATNNFDPANKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCSIDGNQLQLIYEYMENNSLARALFGPHDQRLHLDWPTRMKICQGIARGLAYLHEESTLKIVHRDIKTTNILLDRDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTKYRPKDEFIYLLDWAYVLQEQGNLLELVDPSLGSSYSQDEVMRMLNLALLCTNPSPTLRPSMSSVVSMLEGQAPIQAPVIKCKDSSWDQDARFKSFEMLSHDSQTSKGSQESMEQRGQSMDGPWTDSSMSLSSKDVLSPSSRLLRE 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0309 930 Pfam Protein tyrosine and serine/threonine kinase 586 852 IPR001245 GO:0004672|GO:0006468
Dere08g0309 930 Gene3D Phosphorylase Kinase; domain 1 554 657 - -
Dere08g0309 930 Gene3D - 329 515 - -
Dere08g0309 930 Gene3D Transferase(Phosphotransferase) domain 1 658 868 - -
Dere08g0309 930 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 124 190 - -
Dere08g0309 930 SUPERFAMILY L domain-like 44 287 - -
Dere08g0309 930 Gene3D Ribonuclease Inhibitor 33 289 IPR032675 -
Dere08g0309 930 SUPERFAMILY Protein kinase-like (PK-like) 567 872 IPR011009 -
Dere08g0309 930 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 554 657 - -
Dere08g0309 930 CDD STKc_IRAK 588 855 - -
Dere08g0309 930 MobiDBLite consensus disorder prediction 882 930 - -
Dere08g0309 930 Pfam Malectin domain 331 510 IPR021720 -
Dere08g0309 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 704 716 IPR008271 GO:0004672|GO:0006468
Dere08g0309 930 ProSiteProfiles Protein kinase domain profile. 582 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0309 930 FunFam Putative LRR receptor-like serine/threonine-protein kinase 658 865 - -
Dere08g0309 930 SMART serkin_6 582 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0309 930 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 328 515 - -
Dere08g0309 930 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0309 Dere-ChrDere08 5348583 5356023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0309 39 920 Receptor kinase-like Gene Family AT1G53440 61.957 0.0 1108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere08g0309 PK_Tyr_Ser-Thr 8.8e-48 CL0016