Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0306 ATGAGAGGTTCAGGTGTCAGCTGGGGTGCTTGCCTGGCAGCATCTAAGATGCTGTTTGTGTCAGTTAAGGATGTAATATGGAACTTGTTTGCAAGCTCGTCAATGGGCAACAACTTAGAAATGCCTTATTGTTTGAGAAGCATCAGATGTCCTAAAACAATGTACTCTCTCCATATAAATTGTGGTGGAAAAACGGTAACAGTCAATGGAAGTATAACATATAATGATGATTTAGATGCAGCCGGACCTGCTAGATTCCACCTGCAGAGTGGATCAAACTGGGCATCTAGCACCACTGGTTATTTCTTGAATAATGACCGTGCAGATGAATATACAGTGTCAAATACATCTAGGCTTTCTATGAACGATGCTGAACTGTATATGAATGCACGTGGAAAGAGGGTGCTGGAGAATTTTAATATTGCTGAAGCCGCAGGAGGAGTTGGGAAGGCAGTAACAAAACCATTTACTGCTGTTGTCAGTACTAATACCCTGGAAATTAGATTATATTGGGCTGGGAAAGGGACAACCGCTATCCCATTTAGATCAGTGTATGGTCCTCTTATATCAGCTATATCCGTGGATTCTGGTGGGTTGTGCACTCTATCAGAATTTACACCCCCCTCTGAGAATGGAAGTGGCTTATCTGGTGGGGCTGTGGCAGGAATTGTGGCTGCAGGAGCAGTTATTGTGATCCTGGTATTTGGTATACTTTGGTGGATAGGCTGTATAGGACACAAAAGTTCGTTAGCAAAAGATCTTAAGGGCTTGGATCTGAAAACTGGTGTATTTACCTTAAGGGAAATTAAAGCAGCAACCAACAACTTTGATGCTGCTAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTATAAGGGCATTCTTTTGGATGGCACCGTAATTGCAGTTAAGCTGCTATCTGCTAAATCAAAGCAAGGGAATCGAGATCAGTTGTTGCTAATATACGAGTATATGGAAAACAATAGCCTCGCTCGTGCTTTATTTGGCCCGGAAGAATCCCAGTTAAAATTGGATTGGCCAACAAGACACAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCTTACCTCCATGAAGAATCAAGATTGAAAATCGTTCATAGGGATATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAACCCCAAAATATCTGATTTTGGTTTGGCCAAGCTCGATGAAGAGGATAATACACACATAAGCACTCGAATTGCTGGGACTTAG 1245 0.4209 MRGSGVSWGACLAASKMLFVSVKDVIWNLFASSSMGNNLEMPYCLRSIRCPKTMYSLHINCGGKTVTVNGSITYNDDLDAAGPARFHLQSGSNWASSTTGYFLNNDRADEYTVSNTSRLSMNDAELYMNARGKRVLENFNIAEAAGGVGKAVTKPFTAVVSTNTLEIRLYWAGKGTTAIPFRSVYGPLISAISVDSGGLCTLSEFTPPSENGSGLSGGAVAGIVAAGAVIVILVFGILWWIGCIGHKSSLAKDLKGLDLKTGVFTLREIKAATNNFDAANKIGEGGFGPVYKGILLDGTVIAVKLLSAKSKQGNRDQLLLIYEYMENNSLARALFGPEESQLKLDWPTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGT 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0306 414 ProSiteProfiles Protein kinase domain profile. 276 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0306 414 Gene3D Phosphorylase Kinase; domain 1 251 327 - -
Dere08g0306 414 SUPERFAMILY Protein kinase-like (PK-like) 262 414 IPR011009 -
Dere08g0306 414 Pfam Protein kinase domain 315 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0306 414 SMART serkin_6 276 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0306 414 Gene3D - 129 197 - -
Dere08g0306 414 Gene3D Transferase(Phosphotransferase) domain 1 328 414 - -
Dere08g0306 414 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 315 414 - -
Dere08g0306 414 FunFam Os07g0541700 protein 325 414 - -
Dere08g0306 414 Pfam Malectin domain 131 192 IPR021720 -
Dere08g0306 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0306 Dere-ChrDere08 5306067 5310249 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0306 44 414 Receptor kinase-like Gene Family AT1G53420 49.443 7.20e-130 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere08g0306 Pkinase 5.6e-18 CL0016