Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0303 ATGACCCTCAGTTTTCCTCCATACTTCCTTCTTTTGCTCCTTGCCTTTTCCTTCTCCTTCTCTCTTGCTTCTGGAGCCACTCTCTCACCAGATGAAGTGGAAGCTTTGAAGATAATAGGTGAGAAGCTGGGAAAGAAGGACTGGGACTTCAATGTAGATCCATGCAGTGGACAAGGGAACTGGAATTTAAGTGTTACAGACAACGCTGTGCTCTGCAATTGCTCTCTTATTGATGCTCCTCTCTGCCATGTTACCAACATACGACTGAAATCACTGAGTCTCCCAGGGACGCTCCCGCCAGAACTGGTGAGGCTGCCTTACCTTCAAGAAATTTCCCTTCTTGGAAACCGGCTGACGGGGCAAATCCCAGTAGAGCTAGGAAACATTTCCACTCTCCAGAGTTTGGTCCTGGAGTTCAATCAGTTTTCTGGAAATCTTCCTCCAGAGCTTGGGAATCTTACTGGGATTCAAAGACTGCTGCTTACCTCCAATAATTTTACTGGAGAGTTACCTGCAACATTTGCCAAGCTCACTGCGTTGCAGGATATTCGACTTGGTGACAATCAATTTTCTGGAAAGATACCTGATTTTATTCAGAACTGGACAAGTCTTGATAAGATGGTGATTCAAGGGAGTGGTTTTAGCGGGCCAATACCTTCTGCAATATCACTTCTGGAAACACTAACTGACTTGAGAATTAGTGACCTGAATGGATCTGAATATTCACCTTTACTACAACTTGATAAATTGATAAAATTGGAAATACTGATATTGAGGAATTGCAATATTAATGGAACACTATCTGAAGATCTTGGGTCAATGACAACTTTAAAAACATTAGACCTCAGCTTTAACAAATTGAGTGGAGAGATTCCAATCACCTTTGAAGGCCTAAAGAAAGTGGACCACATATTTTTAACAGGAAACCTTCTCACGGGATCAATACCTGAATGGACAAAGAAAGCGGACATTGTCGCCTCTCACACCATGAGAGGTTCAGGTGTCAGCTGGGGTTCTTGCCTGGCAGCATCTAAGATGCTGTTTGTGTCAGTTAAGGAACTTGTTTGCAAGCTCTTCAGTGGTCAACAACTTCTTGATTCATCTCAATGGTTGCTTACCCCTTTTTTGCTTGTTCCAGCAATGTACTCTCTCCATATAAATTGTGGTGGAAAAACGGTAACTGTCAATGGAAGTAAAACATATGATGATGATTTAGATGCAGCTGGACCTGCTAGATTCCACCTGCAGAGTGGATCAAACTGGGCATCTAGCACCACTGGTTATTTCTTGAATAATGACCGTGCAGATGAATATACAGTGTCAAATACATCTAGGCTTTCTATGAACGATGCTGAACTGTATATGAACGCACGTGTTACTCCCATTTCTCTGACTTATTATGGATTTTGCCTGGGAAATGGAAACTACACAGGAAAGAGGGTGCTGGAGAATTTTAATATTGCTGAAGCCGCAGGAGGAGTTGGGAAGGCAGTAACAAAACCATTTACTGCTGTTGTCAGTACTAATACCCTGGAAATTAGATTATATTGGGCTGGGAAAGGGACAACCGCTATCCCATTTAGATCAGTGTATGGTCCTCTTATATCAGCTATATCCGTGGATTCTGGTGGGTTGTGCACTCTATCAGAATTTACACCCCCCTCTGAGAATGGAAGTGGCTTATCTGGTGGGGCTGTGGCAGGAATTGTGGCTGCAGGAGCAGTTATTGTGATCCTGGTATTTGGTATACTTTGGTGGAGAGGCTGTATAGGACACAGAAGTTCGTTAGCAAAAGGTTATCATGGTAACCAATCCTCTCATGTAAAAGTTTCAAACATTTCTGCTTGGAACTGGGCTTTCGTATTTGCATTGTATGAGTTTGATCTTAAGGGCTTGGATCTGAAAACTGGTGTATTTACCTTAAGGGAAATTAAAGCAGCGACCAACAACTTTGATGCTGCTAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTATAAGGGCATTCTTTTGGATGGCACTGTAATTGCAGTTAAGCTGCTATCTGCTAAATCAAGGCAAGGGAATCGAGATCAATTGTTGCTAATATACGAGTATATGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGCCCAAAAGAATCCCAGTTAAAATTGGATTGGCCAACGAGACACAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCTTACCTCCATGAAGAATCAAGATTGAAAATCGTTCATAGGGATATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAACCCCAAAATATCTGATTTTGGTTTGGCCAAGCTTGATGAAGAGGATAATACGCACATAAGCACTCGAATTGCCGGGACTTAG 2370 0.4228 MTLSFPPYFLLLLLAFSFSFSLASGATLSPDEVEALKIIGEKLGKKDWDFNVDPCSGQGNWNLSVTDNAVLCNCSLIDAPLCHVTNIRLKSLSLPGTLPPELVRLPYLQEISLLGNRLTGQIPVELGNISTLQSLVLEFNQFSGNLPPELGNLTGIQRLLLTSNNFTGELPATFAKLTALQDIRLGDNQFSGKIPDFIQNWTSLDKMVIQGSGFSGPIPSAISLLETLTDLRISDLNGSEYSPLLQLDKLIKLEILILRNCNINGTLSEDLGSMTTLKTLDLSFNKLSGEIPITFEGLKKVDHIFLTGNLLTGSIPEWTKKADIVASHTMRGSGVSWGSCLAASKMLFVSVKELVCKLFSGQQLLDSSQWLLTPFLLVPAMYSLHINCGGKTVTVNGSKTYDDDLDAAGPARFHLQSGSNWASSTTGYFLNNDRADEYTVSNTSRLSMNDAELYMNARVTPISLTYYGFCLGNGNYTGKRVLENFNIAEAAGGVGKAVTKPFTAVVSTNTLEIRLYWAGKGTTAIPFRSVYGPLISAISVDSGGLCTLSEFTPPSENGSGLSGGAVAGIVAAGAVIVILVFGILWWRGCIGHRSSLAKGYHGNQSSHVKVSNISAWNWAFVFALYEFDLKGLDLKTGVFTLREIKAATNNFDAANKIGEGGFGPVYKGILLDGTVIAVKLLSAKSRQGNRDQLLLIYEYMENNSLARALFGPKESQLKLDWPTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGT 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0303 789 SUPERFAMILY L domain-like 61 318 - -
Dere08g0303 789 Pfam Protein kinase domain 690 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0303 789 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Dere08g0303 789 ProSiteProfiles Protein kinase domain profile. 651 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0303 789 Gene3D - 478 543 - -
Dere08g0303 789 Gene3D - 381 477 - -
Dere08g0303 789 Gene3D Transferase(Phosphotransferase) domain 1 703 789 - -
Dere08g0303 789 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 789 - -
Dere08g0303 789 SUPERFAMILY Protein kinase-like (PK-like) 637 789 IPR011009 -
Dere08g0303 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 746 758 IPR008271 GO:0004672|GO:0006468
Dere08g0303 789 Gene3D Phosphorylase Kinase; domain 1 630 702 - -
Dere08g0303 789 Gene3D Ribonuclease Inhibitor 242 327 IPR032675 -
Dere08g0303 789 FunFam Os07g0541700 protein 700 789 - -
Dere08g0303 789 Pfam Malectin domain 383 477 IPR021720 -
Dere08g0303 789 Pfam Malectin domain 478 538 IPR021720 -
Dere08g0303 789 SMART serkin_6 651 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0303 789 FunFam Leucine-rich repeat receptor protein kinase EMS1 79 171 - -
Dere08g0303 789 Gene3D Ribonuclease Inhibitor 37 155 IPR032675 -
Dere08g0303 789 Gene3D Ribonuclease Inhibitor 156 241 IPR032675 -
Dere08g0303 789 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 172 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0303 Dere-ChrDere08 5276050 5285251 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0303 22 789 Receptor kinase-like Gene Family AT1G53420 47.790 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere08g0303 Pkinase 1.4e-17 CL0016