Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0301 ATGAGTTTGGCTCAGTTTTTCATCCTTTCAATCCTCACTTTCTGGTTGACATCTTTTGCTTTTGCAGCCAAGCTGCCGGATGATGAAGTGGAAGCTTTGAAAGACATAGCAAAGACGATGCAGAAGACGGATTGGGACTTCAACGTGGATCCATGCAGTGGTGAAAACGGATGGATTACGCCTAATCCTGTCCATGGCGACGAAAATAACGTCACCTGCGATTGCTCCTTTGTCAATGCCTCCGTCTGCCACAGGTCTTCTGAAGTAGCCATAAATTTAAGACTCTTGAAAGGACAAAATCTTCAAGGCACATTTCCACCTGAACTGATCAGTTCCATCATTGCAAACCGACTAGCCGGCCCAATCCCAGCAGAGCTGGGAAATCTCACCAATCTCAGAAGTTTGGTTTTGGAGTTCAATCAATTATCTGGAAATCTACCCCCAGAGCTTGGGAATCTTGTCCAGCTTCAAAGACTGTTTCTTACTTCCAACAATTTTACTGGGGAGTTACCTGCAACATTTGCGAGGCTCACTAGATTGATAGACTTGAGAATAAGTGACTTGGACGGATCTGATTCCACTTTTCCAGCACTTAATAATATGACAGGATTGAAGACATTGATATTAAGGAGTTGCAATATTAATGGAACACTACCTGAATATCTTGGAACAATGACAAGTATAAAATCCTTAGACCTCAGCTATAACAAATTAACTGGACAAATTCCAGGCACCTATGCTGGCTTAAGAAAAGCACAATACATATATTTAACTGGAAACCTTCTCAGTGGACCAGTGCCTGAGTGGGTAGAGAGATCCGGCTTTGTAGATCTTTCATATAACAACTTCAGCGTTGGAGACACAGGGCAGCTGACATGTGAAACGGGAGCTGTGAACTTGTTTTCAAGCACTTTGACGGGAAGTAACTCGGTAACAGTTCCATGTTTGAGAGGCTTTCGCTGTCCTAAAACCTGGTACTCTCTGCATATTAACTGTGGTGGCAAGCAATTAACAGTGAATGGAAGTAAAATATATGAAGATGATTCAGATGGATCTGGATCAGCAAGATTCCACCGGAGTGAGACAAATTGGATATTGAGCAGCACTGGTTACTTCTTGGATAAAGAAAGCGTAGATTACTATACCTGGTCAAATGCATCTACAATCTCTACAACCAATGCGGAATTATACAAGGATGCACGTGTTTCTCCCCTCTCTCTGAGTTATTATGCATTTTGCATGGGAAACGGAAATTACACAGTAAAGCTTCATTTTGCAGAGATAATGTTCACAGATGATAAAACATATAACAGCCTTGGAAAACGTGTATTTGATGTCTACATTCAGGGAAAGCTGGTGCTGAAGGATTTCAATATTGCCGAAGAAGCAGGAGGAGCAAATAAGGCACTCATAAAAAAATTCACTGCTGTCGTGATTAGGAATTCCTTGGAGATTCACTTCTATTGGGCCGGGAAAGGGACAGTTGCTGTTCCATTCAAATCAGTATATGGTCCTCTTATATCAGCTGTATCTGTAGATCCTGACTTTACACCCCCCTTGGAAAATGGAAGTAGCATATCTGGAGGGGCTGTGGCTGGCATTGTGGTCGCTGGAGCAATTATAGTAATCCTAGTATTTGGTATACTTTGGTGGCAAGGTTGTCTAGGACAGAAAAATTCATTAGCAAGAGAGCTAAAGGGTCTAGATCTACAAACCAGTGTATTTACTTTAAGGCAAATCAAAGCAGCAACAAACAACTTTGACGTTGCCAATAAGATTGGAGAAGGGGGGTTTGGTCCTGTTTACAAGGGTTTTCTGTCAGATGGCACTGCAATAGCAGTAAAGCAACTTTCTTCTAAATCAAGGCAAGGAAACCGTGAGTTTATAAATGAGATTGGCATGATTTCTGCTCTGCAGCACCCTTGTCTTGTAAAACTCTATGGCTGTTGTGTTGAGGGAGATCAATTGTTGCTCATATATGAATACATGGAAAACAACAGCCTCGCTCGTGCTTTATTTGGCAAAGAAGGCCAATTACATTTAGACTGGCCGACTAGGTACCGGATTTGCATTGGTATTGCTAGAGGTTTGGCTTTCCTCCATGAAGAGTCAAGACTGAAGATCGTTCATAGGGACATTAAAGCCACTAATGTGTTGCTTGATAAAGATCTCAATCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGATGAAGAGGACAATACCCACATCAGCACTAGAATAGCTGGAACTTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATCTAAGTGACAAAGCAGACGTGTATAGTTTTGGCATTGTTGCATTAGAAATTGTTAGTGGGAGGAACAACAGCATTCACCAAAGCTTACATCTTCTTGATTGGGCACATCTCTTGAAAGAAAAAGACAATCTAATGGAGCTAGTTGATCCAAGGTTGAATTTGAAGTTTATAACTGCAGAGGCTATGGTGATGATCAATGTAGCTCTCCTGTGCACAAATGTGACTGCATCACTTAGGCCCACCATGTCTTCAGTGGTGAGCATGCTTGAAGACAGAACTGTTCAGGAGGTGGCCTCAGATACAAGTGAGGTATTGGATGAGATGAAGATGCAGGCAATGCAGCAGTATTACCAAAAGCTTGGAAAAGATAAGATAGAAGAGACTCAGAGTCAAAGCCAGGGCATCTCAGTGGAGGGGCCGTGGACAGATTCAACAACATCGGCCAGAGATCTCTATCCTGTCGACCTGGATTCTTCTTATTGGACGCAAAGAAGTTAG 2790 0.4211 MSLAQFFILSILTFWLTSFAFAAKLPDDEVEALKDIAKTMQKTDWDFNVDPCSGENGWITPNPVHGDENNVTCDCSFVNASVCHRSSEVAINLRLLKGQNLQGTFPPELISSIIANRLAGPIPAELGNLTNLRSLVLEFNQLSGNLPPELGNLVQLQRLFLTSNNFTGELPATFARLTRLIDLRISDLDGSDSTFPALNNMTGLKTLILRSCNINGTLPEYLGTMTSIKSLDLSYNKLTGQIPGTYAGLRKAQYIYLTGNLLSGPVPEWVERSGFVDLSYNNFSVGDTGQLTCETGAVNLFSSTLTGSNSVTVPCLRGFRCPKTWYSLHINCGGKQLTVNGSKIYEDDSDGSGSARFHRSETNWILSSTGYFLDKESVDYYTWSNASTISTTNAELYKDARVSPLSLSYYAFCMGNGNYTVKLHFAEIMFTDDKTYNSLGKRVFDVYIQGKLVLKDFNIAEEAGGANKALIKKFTAVVIRNSLEIHFYWAGKGTVAVPFKSVYGPLISAVSVDPDFTPPLENGSSISGGAVAGIVVAGAIIVILVFGILWWQGCLGQKNSLARELKGLDLQTSVFTLRQIKAATNNFDVANKIGEGGFGPVYKGFLSDGTAIAVKQLSSKSRQGNREFINEIGMISALQHPCLVKLYGCCVEGDQLLLIYEYMENNSLARALFGKEGQLHLDWPTRYRICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLSDKADVYSFGIVALEIVSGRNNSIHQSLHLLDWAHLLKEKDNLMELVDPRLNLKFITAEAMVMINVALLCTNVTASLRPTMSSVVSMLEDRTVQEVASDTSEVLDEMKMQAMQQYYQKLGKDKIEETQSQSQGISVEGPWTDSTTSARDLYPVDLDSSYWTQRS 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0301 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672|GO:0006468
Dere08g0301 929 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 556 662 - -
Dere08g0301 929 Gene3D Transferase(Phosphotransferase) domain 1 663 880 - -
Dere08g0301 929 SMART serkin_6 587 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0301 929 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 325 515 - -
Dere08g0301 929 Pfam Malectin domain 327 510 IPR021720 -
Dere08g0301 929 MobiDBLite consensus disorder prediction 889 912 - -
Dere08g0301 929 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 893 - -
Dere08g0301 929 Pfam Leucine rich repeat 203 262 IPR001611 GO:0005515
Dere08g0301 929 SUPERFAMILY L domain-like 96 283 - -
Dere08g0301 929 CDD STKc_IRAK 593 854 - -
Dere08g0301 929 Gene3D - 325 514 - -
Dere08g0301 929 ProSiteProfiles Protein kinase domain profile. 587 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0301 929 Pfam Protein tyrosine and serine/threonine kinase 589 853 IPR001245 GO:0004672|GO:0006468
Dere08g0301 929 SUPERFAMILY Protein kinase-like (PK-like) 571 857 IPR011009 -
Dere08g0301 929 FunFam Putative LRR receptor-like serine/threonine-protein kinase 663 864 - -
Dere08g0301 929 MobiDBLite consensus disorder prediction 891 912 - -
Dere08g0301 929 Gene3D Ribonuclease Inhibitor 75 314 IPR032675 -
Dere08g0301 929 Gene3D Phosphorylase Kinase; domain 1 555 662 - -
Dere08g0301 929 FunFam Leucine-rich repeat receptor protein kinase EMS1 109 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0301 Dere-ChrDere08 5244269 5254658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0301 16 887 Receptor kinase-like Gene Family AT1G53420 51.432 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere08g0301 PK_Tyr_Ser-Thr 4.5e-47 CL0016