Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0287 ATGCCTGGGAATAAGTATAACGGTAATTCTAATCATTTTCCAGGTCGTGTTGAACGACTTTTAAGAGAAAGAGAGCAAAGAAAAAGCAGCAGGGCTTCTCATTTGAATGAGTCAACTGATAATAATAACAGGGTTACTGAACCTTTTGAGCATGACCAGCGTTTAAGAGAAGATAATAACTCAGGTGCCTCCCATGTTAATCAATTCCTGGAAGGGGCTGCAAGGGCGCTTAGCGAGGGATGTGATAAACAAGATGGGAGGCCTTTTAGGCAACGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCTCAGCAGTAAGGAGAGGTGAAGACTCGTGGTCTCTGGAGATTAGTGCTGGAGGTCTAGTTAGCGCTCTTTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCTGGTGTCAACGTGTCTGATGAGATTGGACAGAAGGCCCTTACTAAAGCCTTGGCTGAAAAGAGGTGTATTCCAGTATTTCTTGATGAAGACATTGTTCACCAATACTATAATGGCTACTGCAACAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTACCCCAAGAAGATCGCCTTGCTACCACTCGGAGCTTCCAGTCTCAGTTTGAGGCATATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAACAAGCACTATCAAGAGGGTGATGTTGTTTGGTGCCATGACTACCATCTTATGTTTCTTCCAAAGTGTTTAAAGGACTATAAAAGCAAAATGAAAGTTGGCTGGTTTCTTCACACCCCATTTCCATCTTCTGAAATTCATAGGACATTACCATCACGCTCAGAGCTCCTGCATTCTGTCCTTGCGGCTGATTTAGTAGGTTTTCACACCTATGATTATGCACGCCATTTTGTTAGTGCCTGTACTCGCATTCTTGGACTTGAGGGCACACCTGAAGGGGTTGAGGACCAAGGGAGGCTGACTCGTGTTGCTGCATTTCCAATTGGGATAGACTCAGACCGATTCAGACGTGCACTTGACCTTCCTCAAGTCCAGGAACATATAAAAGAATTACAAGAAAGATTTGAAGGTAGAAAGGTAATGTTAGGTGTCGATCGCCTTGATATGATTAAAGGGATTCCTCAGAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAGAATGCTTATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACAAGAACTGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTGGGTCGCATTAATGGAAGATTTGGAACATTGACTGCTGTTCCTATACATCACCTGGATCGTTCACTTGACTTTCATGCACTATGTGCTTTATATGCTGTTACTGATGTAGCACTGGTCACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGCGAATTTGCTGGTGCTGCACAGTCCCTAGGTGCTGGAGCAATTCTGGTTAACCCCTGGAACATCACAGAAGTTGCTGCTGCAATTGCCCAGGCTCTGAATATGTCATCTGGGGAAAGAGAGAAGCGACATAAGCATAACTATGTGCATGTAACAACCCACACCGCACAGGAATGGGCAGAGACTTTTGTGAGCGAACTAAATGATACTGTTGTTGAGGCACAACTAAGGACCAGACAAGTTCCTCCACCACTTCCAACCAAAACTACAATTGAACGCTATCTGCAGTCAACTAATCGATTGCTCATATTGGGATTCAATGCAACTTTAACTGAACCAATCGAAAAGAAAGGTGATCAGATTAAGGAAATGGAACTCAAGGTGCATCCAGAACTCAAACATCCACTGACAGCTCTTTGTAGCGACCCAAAGACCACAATTGTTGTGCTCAGTGGAAGTGGTCGAGATGTCTTATATAATAACTTTAAGGAATACAACATGTGGTTGGCAGCAGAGAATGGGATGTTTTTGCGCCCTGCAGAGGGAGAATGGATGACAACAATGCCAGAGCATCTGAATATGGAGTGGGTTGACAGTGTGAAGCATGTTTTTGAGTACTTCACAGAGAGAACCCCCCGGTCTCATTTTGATTTTGAAGAGAGGGAAACCTCACTTGTATGGAATTATAAATATGCAGATGTTGAGTTTGGAAGACTTCAAGCAAGGGATATGTTGCAGCATCTCTGGACAGGTCCAATTTCTAATTCATCAGTTGATGTTGTTCAAGGTAGCCGATCTGTTGAGGTGCGAGCTGTTGGTGTTACAAAGGGAGCAGCTATTGACCGCATCCTGGGTGAGATAGTTCACAGTCAATCCATGACAGCACCAATCGATTATGTCCTGTGTGTAGGACATTTTCTGTCAAAGGATGAGGATGTTTATACCTTCTTCGAGCCGGAGCTTCCTTCTGCCGGTGTGGGTGTTCCACGAGCCAAGGTAACAGATGGAGTTAAGTTTCCTGTTGAGAGAAGATCATCTCTGAAGATCCCAACCAGTACTAAAAGTGGACCAAAGTCATCTCAAAATAAGGCACAACGGCCTGTGTCAAATTCTGAGAAGAAAACCACCAACCATATCTGTAGTGCACCAAGACGCCCAGCACCTGAGAAAATCTCATGGAATGTCCTTGACCTCAAGAAGGAGAACTACTTCTCTTGTGCCGTTGGCCGAACTCGGACAAATGCTCGCTATACACTTGGATCGTCGGATGATGTTGTTGCATTTCTGAAGGAACTGGCTCAGGCATCTTCTCCAAACTATTTATCAACAAATTAA 2802 0.4383 MPGNKYNGNSNHFPGRVERLLREREQRKSSRASHLNESTDNNNRVTEPFEHDQRLREDNNSGASHVNQFLEGAARALSEGCDKQDGRPFRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVSDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYKKANQMFADVVNKHYQEGDVVWCHDYHLMFLPKCLKDYKSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFRRALDLPQVQEHIKELQERFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAQALNMSSGEREKRHKHNYVHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPPLPTKTTIERYLQSTNRLLILGFNATLTEPIEKKGDQIKEMELKVHPELKHPLTALCSDPKTTIVVLSGSGRDVLYNNFKEYNMWLAAENGMFLRPAEGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNSSVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSQSMTAPIDYVLCVGHFLSKDEDVYTFFEPELPSAGVGVPRAKVTDGVKFPVERRSSLKIPTSTKSGPKSSQNKAQRPVSNSEKKTTNHICSAPRRPAPEKISWNVLDLKKENYFSCAVGRTRTNARYTLGSSDDVVAFLKELAQASSPNYLSTN 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0287 933 MobiDBLite consensus disorder prediction 23 60 - -
Dere08g0287 933 Pfam Trehalose-phosphatase 612 825 IPR003337 GO:0003824|GO:0005992
Dere08g0287 933 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 339 541 - -
Dere08g0287 933 Gene3D - 679 761 - -
Dere08g0287 933 MobiDBLite consensus disorder prediction 44 59 - -
Dere08g0287 933 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 84 338 - -
Dere08g0287 933 CDD GT20_TPS 92 557 IPR001830 GO:0003824|GO:0005992
Dere08g0287 933 Gene3D Glycogen Phosphorylase B; 84 338 - -
Dere08g0287 933 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 91 560 - -
Dere08g0287 933 Gene3D Glycogen Phosphorylase B; 339 541 - -
Dere08g0287 933 SUPERFAMILY HAD-like 590 922 IPR036412 -
Dere08g0287 933 CDD HAD_TPP 590 809 - -
Dere08g0287 933 Gene3D - 613 775 IPR023214 -
Dere08g0287 933 MobiDBLite consensus disorder prediction 835 866 - -
Dere08g0287 933 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 679 761 - -
Dere08g0287 933 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 92 557 IPR012766 GO:0003825|GO:0005992
Dere08g0287 933 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 84 923 IPR001830 GO:0003824|GO:0005992
Dere08g0287 933 MobiDBLite consensus disorder prediction 833 872 - -
Dere08g0287 933 Pfam Glycosyltransferase family 20 92 557 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0287 Dere-ChrDere08 5057772 5068900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0287 1 926 Trehalose Biosynthesis Gene Families AT1G78580 78.586 0.0 1498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0287 08 5057772 5068900 Dere08g0287 08 5057772 5068900 ECH