Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0281 ATGGAGGCAACACCAACATTTATTTTTCTTGGTGTATATGCAAAGTGGATTGATTTGGACCATGGAAAGAGTGATAAAGGAGGATGGGTCTCATTCGAGTTTGCTCTTCGATCTGGGTTTTCCTTGAGTTTTTACTCTGAAGACTTCGCTTTCTGCTTGATCTATTCCCTTAAAGAAGATAAAGAGGGTGTAAAAGAAGTGAAGGGGAAAAATTACAAGAAAAAGACCAGGAACAAGATGCAGCAAGATCAGCTCAAGAAGGATGTTAATTTGGACTTTTTCACCGAGTACGGGGATGCAAATAGATACAAGAGTCTTGAAGTTATTGGGAAGGGTAGCTATGGCGTAGTTTGTGCAGCAATTGACACGCATACTGGGCAAAAAGTTGCAATAAAAAAGATTCATGATATTTTTGAGCATATCTCTGATGCCATTAGAATCCTTCGTGAAGTCAAGTTGCTAAGGCTTTTAAGACACCCTGATATAGTTGAGATTAAGCGGATTATGTTGCCACCTTCAAAGAGGGAGTTTAAAGATATTTATGTTGTCTTTGAGCTTATGGAGTCTGATCTCCATCAAGTCATCAAAGCTAATGATGACTTGACACGAGAGCACCATCAATTTTTTCTTTACCAGATGCTACGTGCGATGAAGTATATGCATACAGCAAATGTGTATCACAGAGACCTTAAACCCAAGAATATACTGGCAAATGCAAATTGCAAACTCAAAGTTTGTGATTTCGGACTGGCCAGAGTCGCATTCAATGATGCCCCTACAACAATATTCTGGACAGATTATGTAGCTACAAGATGGTATAGAGCTCCGGAGCTGTGCGGATCATTCTTTTCTAAGTATACACCGGCAATTGATATATGGAGCATTGGTTGCATCTTTGCTGAGGTGCTGACAGGAAAGCCATTGTTCCCTGGTAAAAGTGTTGTACATCAATTAGATTTGATTACTGATCTTCTTGGGACACCATCACCAGAAACTATTACCGGAGTTCGAAATGAGAAGGCCAGGAAGTACTTGATGGAAATGAGGAAAAAGTCTCGTGTACCATTTGAAAAGAAATTTCCAAATGCTGATCCATTGGCACTTCGACTATTGCAAAGGCTTCTGGCATTTGATCCTAAGGATCGGCCAACTGCTGAAGAGGCACTAGCTGATCCTTACTTCAAGGGTTTGGCCAAGGTTGAGAGAGAACCATCTTGTCAGCCAATTTCAAAGCTGGAATTTGAGTTTGAGAGGCGAAGGATGACTAAGGAGGATGTTAGGGAACTAATATATCGGGAAATACTGGAATATCATCCTCAGTTGCTTAAAGATTACATGAATGGAACCGAAAGCACAAACTTCATCTATCCTAGTGCAATTGGTCAATTCAGTAAGCAGTTCACTTATTTTGAGGAAAATGGTGGTAAAAGTGGGCCAGTGATTCGTCCAGAAAGGAAGCATGTCTCCCTTCCAAGGTCCACTATTCACTCTAGTGCAATTCCCCCTTATACGCATGGTGCTGCATATGAGAACAAGCAAATCCCAGTAGAGGCATCTAAGAATCTGAGAGCGGCAGAATCAAATTCTGGAAGTCATTTAAGGAGTTCACGACCTCCACCAAGGGTGCCAACAGCTAAACCAGGCAGAGTTGTAGGGCCAGTTATCCCCTATGAGAATGGCAGAAACGTAAACAATTGTGACCCAAGAATCTTTAGTCAAACTGCTCTTCCTCAAGCCGTTTCTCCAGAGTGTTCCTTTAGGGCTCACCCCACAAACGGGGAGAAGATTTTGTCAGAAACATACAAGGATATGTCACAAGGAAAACATCAACTCCCATCTCAGCAGCAGAGTAACTTACCAGCCAAACAAGCTGTTGACCTCAACGCCAACCCTTACTACCAACAAGCCAAGGTAGACCACTTGGACGATCCTGTCACTAGAATCGATGCAAAGTTGCTGCAGGCACAGTCTCAGTTTGGGGCAGTTAGTGTTGCTGCAGTGGCCGTTGCAGCATACAGGCATTCTTCTGGGAAGTTTTAG 2040 0.4245 MEATPTFIFLGVYAKWIDLDHGKSDKGGWVSFEFALRSGFSLSFYSEDFAFCLIYSLKEDKEGVKEVKGKNYKKKTRNKMQQDQLKKDVNLDFFTEYGDANRYKSLEVIGKGSYGVVCAAIDTHTGQKVAIKKIHDIFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRAMKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDAPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETITGVRNEKARKYLMEMRKKSRVPFEKKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKLEFEFERRRMTKEDVRELIYREILEYHPQLLKDYMNGTESTNFIYPSAIGQFSKQFTYFEENGGKSGPVIRPERKHVSLPRSTIHSSAIPPYTHGAAYENKQIPVEASKNLRAAESNSGSHLRSSRPPPRVPTAKPGRVVGPVIPYENGRNVNNCDPRIFSQTALPQAVSPECSFRAHPTNGEKILSETYKDMSQGKHQLPSQQQSNLPAKQAVDLNANPYYQQAKVDHLDDPVTRIDAKLLQAQSQFGAVSVAAVAVAAYRHSSGKF 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0281 679 Pfam Protein kinase domain 103 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0281 679 FunFam Mitogen-activated protein kinase 93 197 - -
Dere08g0281 679 Gene3D Transferase(Phosphotransferase) domain 1 189 417 - -
Dere08g0281 679 ProSitePatterns Protein kinases ATP-binding region signature. 109 133 IPR017441 GO:0005524
Dere08g0281 679 MobiDBLite consensus disorder prediction 523 550 - -
Dere08g0281 679 ProSitePatterns MAP kinase signature. 138 241 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dere08g0281 679 ProSiteProfiles Protein kinase domain profile. 103 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0281 679 SMART serkin_6 103 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0281 679 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 102 433 - -
Dere08g0281 679 SUPERFAMILY Protein kinase-like (PK-like) 99 398 IPR011009 -
Dere08g0281 679 Gene3D Phosphorylase Kinase; domain 1 118 440 - -
Dere08g0281 679 CDD STKc_TDY_MAPK 102 439 - -
Dere08g0281 679 FunFam Mitogen-activated protein kinase 189 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0281 Dere-ChrDere08 4999756 5006198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0281 80 660 MAP Kinase Gene Family AT1G53510 69.950 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dere08g0281 Pkinase 2.3e-65 CL0016