Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0276 ATGGGTTCTGATGCAATAATGGGAAGCGGAGACTACACTCTGCTCAAGGATTTGAGAATGGAAATTGAAGAAAAGGAGGGAACTTTCTCTGTCTGTTTCTGGGTTTATCTAATGAGCTCCACCACATTTCCTGCAACGATTCTCCAACAGGTGCGCTCTGATATCTCAGAAAGTGCTCCTTTTCTTGTAATAAATGAAAATAAGAGAATCAATCTTTTACCAATTATTCTCTTACATGAAGAAGCTCTTAATGCTGGCAATATCAATTCCTGGACAGAAGTTCCACATGCAACTGTAGATTTTGAAATTCCTTCAGAAAAATGGGTTCATGTTGGATGTGAGATTACTCCAGATCATATTCAACTTCAGATCAATGGGGAGATTGTTGGAGGAAAACCTCTGTCTTCCTTATTAAATAAGGAATCCAATTCAAGTAGCTTAAATAAAATTACTTTGGCTTATGTTGGTGGAGATGGCTATATTGTGGAGGGTTATGTGCACAATTTTGAATTCCTGGCCCTTATTTCATCTATTAGGGATCACTATCTAAAGGACCCTCCTCTGAAGTTATCTATTGATGAATTATCTGCCTCTGAGATCGAAGAAGAAAGTGATGGTGTTTGGAGCATTGTTGGTGGCAAGGCATCTTGTCGCAGGAACTTCTCTTTGGACGTTGTTTTATTGAATGCTTTTGGCCAGCCTGTAGACAAGGATAGCGAGGTTTTTGCTTCACTTTTGTATGCTGACACTGGGGCTCCAGTGGAGAATTCAAGTGATGCAGAAGCACCCCTTTTGGCTAGCTTTGATGGGATTGAATTTTCTGCTAATGAAAGACCAAGCAAACTTTTGCAGGGACGTGCATCATTTAAGCTGAAGATATCTCAGCTTTCATCCAAGTGTGATAATAGGTTGTTCCTCATCCGGTTTTGTGTGCCAAAGTTGGGAAATTATCCTTTCTTGGAGACATCATCCCATCCAATTCGATGTATTTCTAGAAGCCGCAACACACGATTGTCCACTTTGGTGTGGAAAAGATCAAATTCTGCTGATGGGTCATTGGAACTTCAGCATTCTGCTCATGAAGCAAAAGTCAGTCCATTAATGAAGCGGTTTAGACTTGGACATGACAAAATATCTGTATCAGTGAAGGCTGACTGCACCTCAGAGCAACCTGATGAGGAATGTAATTCTCATGCCTGGACCACTAATCAGGTTGAGAATGGTTTTGCAATGGGCTTGGAAGGTAGACCTGAGCACTTTGATGAAGCAGATGACTCTCCATCTGATTCAGGGAGTACAGGGGAGGGAAATTCACTGTCCAAGACTACAGCAAGTAGAAGAAATCCAATCTCTGATATGACCATATTCAAATACTGCCTGGCAGGCTTGTGTGAGAGGTCTCTTATGCTCAAGGAAATAGCTAGCTCAGCCTCTGACAAAGAAATTTCAGAATTGGCAACTCAGGTGTCACACTATTCAGGATGTTCACACTACGGGAACCAAATATCAATTGCCAAGAGATTGATAGAAGAAGGAACTCTAGTTTGGAAGACGTTGTCCCAAAACAACCACAATATTCGGTGGGAGAGTGCTGTTTATGAGATTGAAGAGCAATTCATGAAGATTGCTTGTTGCAGTTCAAGATCTCTCACACTCCAGGACCTAGAGCTTCTGAGAAGAATTGCTGGATGTCAAGAGTATCTAGTCCAAGAGAATTTTGAGAAGATGTGGTGCTGGTTATACCCAGTAGCTTTTACAATTTCAAGGGAGCGGATAAACCCTATCTGGAAATCAACGTCACCAAAGTGGATAGAAGGATTCATAACTAAGGAAGAAGCAGAAGCTTCACTTCAAGGTCCCAGGGGGCTTCAAGAACCTGGGACATTTGTACTCCGATTCCCCACCTCGAGAAGTTGGCCCCACCCAGATGCTGGAAGTCTAATTGTGACTTATGTTGGCAGTGATTACAAACTTCACCACAGGCTACTTTCAATTGATCATATCTATGGCTCTGGAGATAGAGGAACTGCCGCGAAACCACTACAAGATATGCTACTGGCAGAACCTGAGCTATCTAGACTAGGAAGGATTATAAGAAGTCACTAA 2106 0.4198 MGSDAIMGSGDYTLLKDLRMEIEEKEGTFSVCFWVYLMSSTTFPATILQQVRSDISESAPFLVINENKRINLLPIILLHEEALNAGNINSWTEVPHATVDFEIPSEKWVHVGCEITPDHIQLQINGEIVGGKPLSSLLNKESNSSSLNKITLAYVGGDGYIVEGYVHNFEFLALISSIRDHYLKDPPLKLSIDELSASEIEEESDGVWSIVGGKASCRRNFSLDVVLLNAFGQPVDKDSEVFASLLYADTGAPVENSSDAEAPLLASFDGIEFSANERPSKLLQGRASFKLKISQLSSKCDNRLFLIRFCVPKLGNYPFLETSSHPIRCISRSRNTRLSTLVWKRSNSADGSLELQHSAHEAKVSPLMKRFRLGHDKISVSVKADCTSEQPDEECNSHAWTTNQVENGFAMGLEGRPEHFDEADDSPSDSGSTGEGNSLSKTTASRRNPISDMTIFKYCLAGLCERSLMLKEIASSASDKEISELATQVSHYSGCSHYGNQISIAKRLIEEGTLVWKTLSQNNHNIRWESAVYEIEEQFMKIACCSSRSLTLQDLELLRRIAGCQEYLVQENFEKMWCWLYPVAFTISRERINPIWKSTSPKWIEGFITKEEAEASLQGPRGLQEPGTFVLRFPTSRSWPHPDAGSLIVTYVGSDYKLHHRLLSIDHIYGSGDRGTAAKPLQDMLLAEPELSRLGRIIRSH 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0276 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 8 165 IPR013320 -
Dere08g0276 701 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 26 692 IPR001217 GO:0003700|GO:0006355|GO:0007165
Dere08g0276 701 MobiDBLite consensus disorder prediction 415 445 - -
Dere08g0276 701 CDD SH2_SHA 592 701 - -
Dere08g0276 701 Gene3D SH2 domain 589 698 IPR036860 -
Dere08g0276 701 ProSiteProfiles Src homology 2 (SH2) domain profile. 603 701 IPR000980 -
Dere08g0276 701 MobiDBLite consensus disorder prediction 427 445 - -
Dere08g0276 701 FunFam SH2 domain protein B 589 701 - -
Dere08g0276 701 SUPERFAMILY SH2 domain 599 691 IPR036860 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Dere08g0276 None None None