Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0273 ATGAACAATGTCCTTACAACTTTACTCAATCTTCAATTTGATCCATATATTTTAAAACATCAAATGAGCAAGTCTCTGGTTTTAGCCTTTTACATCACCATATGCTGCATCGCTTTTGTCATTTCCAAGATCATCATCTCAGTTCTCCTCTACAAAATATGGAAAAGAAGGCACATGATTCACGAAGAAGCTTATTCAGGTGGGAAGATGGTAATATTTAGGTCTTCAGTGCTTCAATCTCTCACATCTGATATGGTTTTAAAGAAGACATTGAAACTGAGCAACAAGGACATTATTGGATCTGGAGGGTATGGGACAGTTTATAAACTGAACATTGATGACTTCACAGCCTTTGCAGTGAAAAGGCTCAACAAAGGAACTGCAGATAGAGAGAGAGGCTTCGAGAGAGAGTTGGAAGCAATGGCAGACATAAAACACTGCAACATTGTGACCCTTCATGGTTACTATACTGCCCCACACTACAACCTTCTCATATATGAGCTAATGCCTAATGGAAGTTTGGATTCCTTTCTACATGGGAGATCAATGGACAAGAAGTTTCTGGATTGGCCCTCAAGATACAGTATAGCCATAGGTGCTGCTAGAGGAATATCATATCTTCACCATGATTGCATCCCTCACATTATCCACAGAGACATCAAGTCGAGTAATATATTGCTGGATCAGAACATGGAGGCTCGAGTTTCTGATTTTGGATTAGCCACGTTAATGGAACCCAATAAAACTCATGTTACTACAATTGTGGCTGGAACTTTCGGATACTTGGCCCCTGAATATTTTGATACAGGAAAAGCAACTGTAAAAGGGGATGTCTACAGCTTTGGAGTTGTGCTATTGGAGCTTTTAACTGGGAAGAAACCCAGTGATGAAGCATTTATGGAAGAGGGAACCAATCTTGTCACATGGGTGAAGGCTGTTGTACGAGGGAAGAAGGAAGAGTTAGTTCTTGACAACAGATTAGGGTCTTGTCCGATGCAAGAGGTTGACAATGTGTTCAAAATTGCAATGATGTGTCTTGACCAAGATCCTCTGAAGAGGCCAACCATGGCTGAGGTTGTCACCTTGCTCAAGCAAACAAAACCAGATAAACTTGTTACAGCTTCAGTACGAGAAGATTATAATGTAGAATCACAATCGAACAAGATGTACATGGCAGCACTAGGATAA 1188 0.4049 MNNVLTTLLNLQFDPYILKHQMSKSLVLAFYITICCIAFVISKIIISVLLYKIWKRRHMIHEEAYSGGKMVIFRSSVLQSLTSDMVLKKTLKLSNKDIIGSGGYGTVYKLNIDDFTAFAVKRLNKGTADRERGFERELEAMADIKHCNIVTLHGYYTAPHYNLLIYELMPNGSLDSFLHGRSMDKKFLDWPSRYSIAIGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMEARVSDFGLATLMEPNKTHVTTIVAGTFGYLAPEYFDTGKATVKGDVYSFGVVLLELLTGKKPSDEAFMEEGTNLVTWVKAVVRGKKEELVLDNRLGSCPMQEVDNVFKIAMMCLDQDPLKRPTMAEVVTLLKQTKPDKLVTASVREDYNVESQSNKMYMAALG 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0273 395 ProSitePatterns Protein kinases ATP-binding region signature. 99 121 IPR017441 GO:0005524
Dere08g0273 395 FunFam Receptor-like serine/threonine-protein kinase 64 168 - -
Dere08g0273 395 ProSiteProfiles Protein kinase domain profile. 93 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0273 395 SUPERFAMILY Protein kinase-like (PK-like) 76 363 IPR011009 -
Dere08g0273 395 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 169 375 - -
Dere08g0273 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Dere08g0273 395 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 26 367 - -
Dere08g0273 395 Gene3D Phosphorylase Kinase; domain 1 68 168 - -
Dere08g0273 395 SMART serkin_6 93 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0273 395 Pfam Protein kinase domain 95 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0273 395 Gene3D Transferase(Phosphotransferase) domain 1 169 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0273 Dere-ChrDere08 4933382 4937481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0273 66 365 Receptor kinase-like Gene Family AT2G35620 50.000 1.53e-96 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Dere08g0273 Pkinase 1.5e-48 CL0016