Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0272 ATGCGCCAATCTTACCGAAGAGTTTCGCCTACTCTTTATCCTTTCTCATCTTTCTGTAAGCTCACACTACCCTTTGCACTGTTCGTTTTATCACTAATGTGCAGGAAAGGCATCACCGTCCCTTCTTTAATCATCGCTTTGCGGAAGAATTTTCCAGATAGAAGGAAGACGCTGGGTTGGTGGATTTTATTGGTAGTAGTGATCACATCAGTAGTGTATCCCCTAATAGCCATATGTGCTGCTAGTGGAATATCATATCTTCACCATGATTGCATCTCTCACATTATCCACCGAGATATCAAGTCGAGTAATATATTGCTGGATCAGAACATGGAGGCTCGAGTTTCTGATTTTGGATTAGCCACGTTAATGGAACAGAATGAAGCTCATGTTACAACAATTAAAAGGCCACGGGTGATGTGTCTTGAACCAGAGAAGAAGGTAGAGTTAGTTCTTGACAACAGATTAGGGTCTTGTCTGATGAAAGAGGTTGACAATGTGTTAAACGTTGCATTCATGTGTCTTGAACCAGATTCTGTGGAGGCCAACCATGGCTGA 558 0.4211 MRQSYRRVSPTLYPFSSFCKLTLPFALFVLSLMCRKGITVPSLIIALRKNFPDRRKTLGWWILLVVVITSVVYPLIAICAASGISYLHHDCISHIIHRDIKSSNILLDQNMEARVSDFGLATLMEQNEAHVTTIKRPRVMCLEPEKKVELVLDNRLGSCLMKEVDNVLNVAFMCLEPDSVEANHG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0272 185 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0272 185 Pfam Protein kinase domain 78 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0272 185 Gene3D Transferase(Phosphotransferase) domain 1 70 145 - -
Dere08g0272 185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 95 107 IPR008271 GO:0004672|GO:0006468
Dere08g0272 185 PANTHER OS01G0750732 PROTEIN 76 134 - -
Dere08g0272 185 SUPERFAMILY Protein kinase-like (PK-like) 75 132 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0272 Dere-ChrDere08 4925145 4927126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0272 76 145 Receptor kinase-like Gene Family AT2G35620 65.714 1.30e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Dere08g0272 Pkinase 4.1e-13 CL0016