Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0259 ATGAATCCGGATCAAATAAAGGAAGTGTTTAATAGAAATTATGACTTCGTAAAACCTCACATAAATCGTCCTATTGTCAAGTATATAGGCTCTAGTCTTCCAAACTATGATGGCGACATCTGGGCTAAACACAGAAAGATTATCAATGCCCCATTCCATTCAGAAAAATTGAAGACACTGCTGCCAACCATTTCCCAGAGCTGCAATGACATGATAAGCAAATGGGAAAAAATGTTGTCTGCCTCAGATGCAACTTGTGAAGTGGATGTATGGCCTTGGATTAAGAATTTGGCAAAGGATGTTATTTCTCGAGCTGCATTTGGAAGTAACTATGAAGAAGGCAGACAAATATTTGAACTTCTGACAGAGCAAGACAATAGGAGGATGAAGGAAATTGATAGAATGGTGGAAGCTTCACTGACGTGTATCATTGACATGAAGGAGAAAGCCATGAAGGCAGGCCAAGAAACTACTTCTGCTTTGCTTTTGACAATGATCTTGTACGAGGTTCTAAGATTATACCCTCCATCAGCATGGATGGAACGATCTGCCAAAAGGGACATCAAACTTGGAAAATTGTCATTACCTGCAGGAGCTCTGCTTTTCGTACCAATACTTATGGTTCATCGTGACAAAGAGATGTGGGGGGATGATGCCAAGGAGTTCAAACCAGAGAGGTTTTCTGAAGGAATCTCAAAGGCAGGGAAAGGTGCTTCACCAGCATTCTTCCCATTCGGATGGGGTCCTCGAATGTGCATTGCACAAAACTTTGCCTTATTGGAGGTAAAGATGGCTTTATCATTGATTTTACAACGCTTCTGGTTCGAGCTTTCCCCGGCATATTCTCATACTCCTACCGTTGTCATTACTCTACAGCCACAACATGGGGTTCATGTCATTTTACATAAACTTTGA 915 0.4142 MNPDQIKEVFNRNYDFVKPHINRPIVKYIGSSLPNYDGDIWAKHRKIINAPFHSEKLKTLLPTISQSCNDMISKWEKMLSASDATCEVDVWPWIKNLAKDVISRAAFGSNYEEGRQIFELLTEQDNRRMKEIDRMVEASLTCIIDMKEKAMKAGQETTSALLLTMILYEVLRLYPPSAWMERSAKRDIKLGKLSLPAGALLFVPILMVHRDKEMWGDDAKEFKPERFSEGISKAGKGASPAFFPFGWGPRMCIAQNFALLEVKMALSLILQRFWFELSPAYSHTPTVVITLQPQHGVHVILHKL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0259 304 PANTHER CYTOCHROME P450 FAMILY MEMBER 162 296 - -
Dere08g0259 304 SUPERFAMILY Cytochrome P450 2 302 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0259 304 Pfam Cytochrome P450 2 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0259 304 Pfam Cytochrome P450 162 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0259 304 PRINTS P450 superfamily signature 252 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0259 304 PRINTS P450 superfamily signature 243 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0259 304 PRINTS P450 superfamily signature 165 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0259 304 Gene3D Cytochrome P450 156 304 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0259 304 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 245 254 IPR017972 GO:0005506|GO:0016705
Dere08g0259 304 Gene3D Cytochrome P450 1 149 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0259 304 PRINTS E-class P450 group IV signature 236 252 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0259 304 PRINTS E-class P450 group IV signature 160 176 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0259 304 PRINTS E-class P450 group IV signature 252 270 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0259 Dere-ChrDere08 4699471 4701928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0259 1 304 Cytochrome P450 AT3G14680 42.365 6.86e-109 324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0259 08 4699471 4701928 Dere08g0259 08 4699471 4701928 ECH