Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0252 ATGGCGCTCTCTCAATTTCTGCCTCATCAGCTCTGGTTTTTCCAGTTCAGCCATGGAAGCATCAGTGAGTTTGCAGTTTCCATGTCTCTTGGTATAGTGATCGTTGTGACAGTGATAGTGACAGTAAGAGTGGTCAATTGGGGGTGGGTGAGGCCTAGAAGACTAGAGAGATGCCTCAGAAAACAGAGCCTCAAGGGAAACTCATACAGAATTGTCGTTGGAGACTTCAAAGAGATGAGCCTCATGACCAGAGAAGCCAATTCCAAGCCCATTAGCTTAGATGATGACATTGTTCCTCGTATTCTTCCCTTTCATCATCAAATGATCCTCAATCATGGTAAGAACTCATTTATTTGGTTTGGTCCAACGCCAGTGATAACTATTACAACCCCAGAAGAGATAAAGGATGTTTTCAGCAAGATTTCTGCATTTCAAAAGCCTCATAACAATCCACTGGCAAAATTTCTTATCAACGGACTAGTACACTACAACGGTGACAAATGGATTAAGCACAGAAAAATTATCACCCCTGCCTTTCATTTTGAGAAGTTAAAGCTTATGGTACCAGCAGTGTACCAGTGTTGTAATGAAATGATAAAGAAATGGAAGAGATTCGTATGTGAAAAGGGTTATTGTGAGATAGACGTATGGCCTTTCTTCCATAGCTTGACAGGCGATGTCATTTCTCGAACTGCTTTTGGAAGTAGTTACGAACAAGGCAAACGAATCTTCCAACTTCAAATTGAGCAAACTCATCTTACTGGGAAGGTCTTGCGTTCTATTTATATTCCAGGCTGGAGATTTGTACCAACTAAGCTGAATCGGAGATTGAAGGAAATAGAGAATGAAATACGAGTGTTAGTAAGGGGAATCATCCAACAAAGGGAGAAGGCCAGGGAGACAGGAGAAGCCCCATGTAATGACCTTTTAGGTATACTTTTGGAATCCAATCGCAGAGAAATCAAAGATCACGGAAACAACAAGAACGTGGGAATGAGCATTGAGGATGTTACAAAGGAATGTAAATTGTTTTATCTAGCGGGACAAGAGACCACTGCTACTCTGCTTAATTGGACAATTGTGTTACTCAGCAAGTTTCCCATTTGGCAAGCTCGGGCAAGAGAAGAGGTCTTCCAACTATTTGGCACTCAAAAACCTCACTATGATGGCTTAAATCACCTCAAAGTGGTAAGTATGATATTATACGAGGTTCTTAGGTTATACCCAGCGACTCCTTTGTTGACAAGGGTTGTATCAGAAGAAACAAGACTTGGAAATATGACTTTACCAGCTGGAACTCGAGTTGGAATTCCAGTTATTCTACTTCACCAAGATCCCCAATTCTGGGGAGATGATGCGAAGGAGTTCAAACCAGAGAGATTTTCTGAAGGAATCTCAAAAGCAACCAAGAGCCAAACTTCATATCTGCCTTTTGGCTGGGGTCCAAGGATATGCATTGGTCAAAACTTTGCTTTGCTTGAAGCTAAAATGGCTCTGTGCTTGATTCTCCAGAACTTCTCCTTCGAGCTTTCTCCATCTTATGCTCATGCTCCTTTCATGGTTTTGACCTTGCAACCTCAGTTTGGTACCCATATTATTTTACGTGAGCTCTAG 1614 0.417 MALSQFLPHQLWFFQFSHGSISEFAVSMSLGIVIVVTVIVTVRVVNWGWVRPRRLERCLRKQSLKGNSYRIVVGDFKEMSLMTREANSKPISLDDDIVPRILPFHHQMILNHGKNSFIWFGPTPVITITTPEEIKDVFSKISAFQKPHNNPLAKFLINGLVHYNGDKWIKHRKIITPAFHFEKLKLMVPAVYQCCNEMIKKWKRFVCEKGYCEIDVWPFFHSLTGDVISRTAFGSSYEQGKRIFQLQIEQTHLTGKVLRSIYIPGWRFVPTKLNRRLKEIENEIRVLVRGIIQQREKARETGEAPCNDLLGILLESNRREIKDHGNNKNVGMSIEDVTKECKLFYLAGQETTATLLNWTIVLLSKFPIWQARAREEVFQLFGTQKPHYDGLNHLKVVSMILYEVLRLYPATPLLTRVVSEETRLGNMTLPAGTRVGIPVILLHQDPQFWGDDAKEFKPERFSEGISKATKSQTSYLPFGWGPRICIGQNFALLEAKMALCLILQNFSFELSPSYAHAPFMVLTLQPQFGTHIILREL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0252 537 Pfam Cytochrome P450 112 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 478 487 IPR017972 GO:0005506|GO:0016705
Dere08g0252 537 SUPERFAMILY Cytochrome P450 100 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 Coils Coil 277 297 - -
Dere08g0252 537 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 PRINTS E-class P450 group I signature 356 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 PRINTS E-class P450 group I signature 475 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 PRINTS E-class P450 group I signature 485 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 PRINTS E-class P450 group I signature 223 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 PRINTS E-class P450 group I signature 109 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 PRINTS E-class P450 group I signature 336 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 PRINTS P450 superfamily signature 476 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 PRINTS P450 superfamily signature 485 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 PRINTS P450 superfamily signature 347 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 Gene3D Cytochrome P450 97 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0252 537 PANTHER CYTOCHROME P450 FAMILY MEMBER 39 529 - -
Dere08g0252 537 CDD CYP72 102 533 - -
Dere08g0252 537 FunFam Cytochrome P450 734A1 49 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0252 Dere-ChrDere08 4581897 4587012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0252 27 537 Cytochrome P450 AT3G14680 56.250 0.0 612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0252 08 4581897 4587012 Dere08g0252 08 4581897 4587012 ECH